HHsearch alignment for GI: 254780483 and conserved domain: PRK02463
>PRK02463 OxaA-like protein precursor; Provisional.
Probab=100.00 E-value=0 Score=479.94 Aligned_cols=218 Identities=28% Similarity=0.507 Sum_probs=190.6
Q ss_pred HCC-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC--C-
Q ss_conf 011-03568999999998876320-1639999999999998889999999999----9888778889999973145--1-
Q gi|254780483|r 336 WGW-FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQPKIDELREKFKQ--S- 406 (581)
Q Consensus 336 ~Gw-f~~i~kplf~~L~~l~~~i~-NyGiaIIllTilikli~~PLt~ks~~Sm----~kM~~lqP~i~~i~ekyk~--d- 406 (581)
T Consensus 34 ~G~~~~~~v~p~~~~i~~~a~~~g~nyG~aIIl~TiiIRlillPL~~~Q~kk~~~~q~KMq~lQPe~~~IQ~KyK~~~~~ 113 (307)
T PRK02463 34 TGMIWNFLGKPMSYFIDYFANNLGLGFGLAIIIVTIIVRTLILPLGLYQSWKATYQSEKMAYLKPVFEPINERLKNAKTQ 113 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCH
T ss_conf 74089999999999999999863877338999999999999983018899988999999998587899999984378988
Q ss_pred -HHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf -1567899999998504878678--8999999999999999999876986288753410000335725666764102222
Q gi|254780483|r 407 -PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY 483 (581)
Q Consensus 407 -~~~~~~~e~m~ly~~~~vnP~~--GClP~l~q~p~~~a~~~~~~~~ielr~~~f~~Wi~dls~~d~~~~~~~~~~~p~~ 483 (581)
T Consensus 114 e~k~~~qqEmm~LYke~gvNP~gs~GCLPlLIQmPIf~aLY~ai~~~~~l~~~~F-lwi-~Lg~p~--~----------- 178 (307)
T PRK02463 114 EEKMAAQTELMAAQRENGISMLGGIGCLPLLIQMPFFSALYFAAQYTKGVSSSTF-LGI-DLGSRS--L----------- 178 (307)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEE-ECCCCC--H-----------
T ss_conf 9999999999999998498976444337899999999999999974233236865-545-688732--9-----------
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH---HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 02789999999999999999975288774689---999-99996899999998787999999999999999999999874
Q gi|254780483|r 484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM 559 (581)
Q Consensus 484 ~~~~~~~~ilp~l~~~~m~~~~k~~p~~~d~~---q~~-~~~~mp~~~~~~~~~~~~gl~~y~~~~~~~~~~qq~~i~~~ 559 (581)
T Consensus 179 --------iL~ila~v~~fiq~~ls~~~~~~~q~~qmk~Mm~~mPimi~~~~~~~PagL~LYW~vsnl~~IiQqliin~~ 250 (307)
T PRK02463 179 --------VLTAIIAALYFFQSWLSMMGVPEEQREQMKTMMYMMPIMMVFFSFSSPAGVALYWLVGGFFSIIQQLITTYI 250 (307)
T ss_pred --------HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf --------999999999999999627789868899999999999999999998758999999999899999999999622
Q ss_pred CCCCCCHHHHHHHHHHCCC
Q ss_conf 7998347989888852046
Q gi|254780483|r 560 HGAEIGLIDRLRSTFSKNY 578 (581)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~ 578 (581)
T Consensus 251 ~--~p~~~~~i~~e~~~~p 267 (307)
T PRK02463 251 L--KPRLRKQIKEEFAKNP 267 (307)
T ss_pred C--CHHHHHHHHHHHHHCC
T ss_conf 6--7679999999987289