HHsearch alignment for GI: 254780483 and conserved domain: PRK02463

>PRK02463 OxaA-like protein precursor; Provisional.
Probab=100.00  E-value=0  Score=479.94  Aligned_cols=218  Identities=28%  Similarity=0.507  Sum_probs=190.6

Q ss_pred             HCC-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC--C-
Q ss_conf             011-03568999999998876320-1639999999999998889999999999----9888778889999973145--1-
Q gi|254780483|r  336 WGW-FYFIAKPMFMLMSYFYNLVG-NFGIAIMLTTVFVKLLFFPLAKKQYVST----ANMKNIQPKIDELREKFKQ--S-  406 (581)
Q Consensus       336 ~Gw-f~~i~kplf~~L~~l~~~i~-NyGiaIIllTilikli~~PLt~ks~~Sm----~kM~~lqP~i~~i~ekyk~--d-  406 (581)
T Consensus        34 ~G~~~~~~v~p~~~~i~~~a~~~g~nyG~aIIl~TiiIRlillPL~~~Q~kk~~~~q~KMq~lQPe~~~IQ~KyK~~~~~  113 (307)
T PRK02463         34 TGMIWNFLGKPMSYFIDYFANNLGLGFGLAIIIVTIIVRTLILPLGLYQSWKATYQSEKMAYLKPVFEPINERLKNAKTQ  113 (307)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCH
T ss_conf             74089999999999999999863877338999999999999983018899988999999998587899999984378988


Q ss_pred             -HHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf             -1567899999998504878678--8999999999999999999876986288753410000335725666764102222
Q gi|254780483|r  407 -PPQVLQKAMIQLYKTHNINPLA--GCWPILLQIPVFFAIYKVISISLEMRHAPFWGWIKDLAAADPTNIFTLFGILPFY  483 (581)
Q Consensus       407 -~~~~~~~e~m~ly~~~~vnP~~--GClP~l~q~p~~~a~~~~~~~~ielr~~~f~~Wi~dls~~d~~~~~~~~~~~p~~  483 (581)
T Consensus       114 e~k~~~qqEmm~LYke~gvNP~gs~GCLPlLIQmPIf~aLY~ai~~~~~l~~~~F-lwi-~Lg~p~--~-----------  178 (307)
T PRK02463        114 EEKMAAQTELMAAQRENGISMLGGIGCLPLLIQMPFFSALYFAAQYTKGVSSSTF-LGI-DLGSRS--L-----------  178 (307)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EEE-ECCCCC--H-----------
T ss_conf             9999999999999998498976444337899999999999999974233236865-545-688732--9-----------


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH---HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             02789999999999999999975288774689---999-99996899999998787999999999999999999999874
Q gi|254780483|r  484 LPGFMHVGIWPIIMSLSMFIQMKMSPPPADKG---QAM-ILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKM  559 (581)
Q Consensus       484 ~~~~~~~~ilp~l~~~~m~~~~k~~p~~~d~~---q~~-~~~~mp~~~~~~~~~~~~gl~~y~~~~~~~~~~qq~~i~~~  559 (581)
T Consensus       179 --------iL~ila~v~~fiq~~ls~~~~~~~q~~qmk~Mm~~mPimi~~~~~~~PagL~LYW~vsnl~~IiQqliin~~  250 (307)
T PRK02463        179 --------VLTAIIAALYFFQSWLSMMGVPEEQREQMKTMMYMMPIMMVFFSFSSPAGVALYWLVGGFFSIIQQLITTYI  250 (307)
T ss_pred             --------HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             --------999999999999999627789868899999999999999999998758999999999899999999999622


Q ss_pred             CCCCCCHHHHHHHHHHCCC
Q ss_conf             7998347989888852046
Q gi|254780483|r  560 HGAEIGLIDRLRSTFSKNY  578 (581)
Q Consensus       560 ~~~~~~~~~~~~~~~~~~~  578 (581)
T Consensus       251 ~--~p~~~~~i~~e~~~~p  267 (307)
T PRK02463        251 L--KPRLRKQIKEEFAKNP  267 (307)
T ss_pred             C--CHHHHHHHHHHHHHCC
T ss_conf             6--7679999999987289