HHsearch alignment for GI: 254780483 and conserved domain: PRK02654
>PRK02654 putative inner membrane protein translocase component YidC; Provisional.
Probab=100.00 E-value=0 Score=480.19 Aligned_cols=241 Identities=28% Similarity=0.515 Sum_probs=188.2
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHCCCCHHH
Q ss_conf 3201103568999999998876320163999999999999888999999999998887788899----999731451156
Q gi|254780483|r 334 IDWGWFYFIAKPMFMLMSYFYNLVGNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKID----ELREKFKQSPPQ 409 (581)
Q Consensus 334 vd~Gwf~~i~kplf~~L~~l~~~i~NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~----~i~ekyk~d~~~ 409 (581)
T Consensus 1 md~gig~~~~~~~~~il~f~~~~~~nyG~aIillTi~ir~~l~PL~~kq~~s~~kM~~~qP~~~~~~~ei~~kyk~d~-~ 79 (376)
T PRK02654 1 MDFGIGFISNNVMLPILDFFYGIVPSYGLAIVALTLVIRFALYPLSAGSIRNMRRMKIAQPVMQKRQAEIQERYKNDP-Q 79 (376)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCH-H
T ss_conf 975134786537999999999601309999999999999999874899999999998858546799999998713889-9
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------HHCCCCC-----CCCCCC-
Q ss_conf 789999999850487867889999999999999999998769-------------------8628875-----341000-
Q gi|254780483|r 410 VLQKAMIQLYKTHNINPLAGCWPILLQIPVFFAIYKVISISL-------------------EMRHAPF-----WGWIKD- 464 (581)
Q Consensus 410 ~~~~e~m~ly~~~~vnP~~GClP~l~q~p~~~a~~~~~~~~i-------------------elr~~~f-----~~Wi~d- 464 (581)
T Consensus 80 k~q~e~m~lyk~~g-nPl~GCLP~liQmPi~~aLy~vlr~~pfa~v~Y~~~vki~~~~~i~~I~~~~~~s~~~~if~~~~ 158 (376)
T PRK02654 80 KQQEEMGKLMKEFG-NPLAGCLPLLVQMPILFALFATLRGSPFADVNYTVNLQVLPSEQIAAVEPKPFKSKPHNIFITEG 158 (376)
T ss_pred HHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCHHEEECCC
T ss_conf 99999999998719-97488899999999999999999558753455433200050877777323446775300011244
Q ss_pred --------------------------------------------------------------------CCCCCHH---HH
Q ss_conf --------------------------------------------------------------------0335725---66
Q gi|254780483|r 465 --------------------------------------------------------------------LAAADPT---NI 473 (581)
Q Consensus 465 --------------------------------------------------------------------ls~~d~~---~~ 473 (581)
T Consensus 159 ~h~~v~a~lp~g~kl~vg~~v~~~~~~~~g~~~~~~~~~~~~~~~~p~w~v~~g~~~~~~~~dgt~~al~pgd~~i~~~I 238 (376)
T PRK02654 159 VHYPVIASLPGGTKLGVGESVQIQLQTTEGKSFSQLLAEYNGSKLSPTWKVTKGEERVKVSADGTIEALAPGDATVQVTI 238 (376)
T ss_pred CCCCEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEECCC
T ss_conf 45530121467653355641246631567621888875244100486301204664111356665001366543000014
Q ss_pred HHH-----------HHCCCCCCHHHH--HHHHHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHH--HHHHHHHH
Q ss_conf 676-----------410222202789--9999999999999999752887--746899999999689999--99987879
Q gi|254780483|r 474 FTL-----------FGILPFYLPGFM--HVGIWPIIMSLSMFIQMKMSPP--PADKGQAMILNWMPVVFV--FALSSFPA 536 (581)
Q Consensus 474 ~~~-----------~~~~p~~~~~~~--~~~ilp~l~~~~m~~~~k~~p~--~~d~~q~~~~~~mp~~~~--~~~~~~~~ 536 (581)
T Consensus 239 pgiaa~~~Fl~I~aL~~vg~~~~g~I~w~Ilili~~~Gvsl~lsQ~ls~~~~~~npqq~~mnkimPvMfsgmFlfF~LPa 318 (376)
T PRK02654 239 PGLAAKSGFLFIKALGRVGFYDDGAINWDILGMVGGFGVSLYLSQVLSGQGMPANPQQSTANKITPVMFSGMFLFFPLPA 318 (376)
T ss_pred CCHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 20220477503332234565556514488999999999999999997279999997999999874899988897011337
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
Q ss_conf 99999999999999999999874799834798988885204
Q gi|254780483|r 537 GLIIYWSWSNVISIVQQAVIMKMHGAEIGLIDRLRSTFSKN 577 (581)
Q Consensus 537 gl~~y~~~~~~~~~~qq~~i~~~~~~~~~~~~~~~~~~~~~ 577 (581)
T Consensus 319 GvgLYWvisnIfq~vQq~iLnK~~-~penlqkii~e~~~~~ 358 (376)
T PRK02654 319 GVLLYMVIANIFQTLQTFLLSREP-LPENLQKILDELQKSK 358 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHH
T ss_conf 899999999999999999995568-8565999999998766