HHsearch alignment for GI: 254780483 and conserved domain: pfam02096
>pfam02096 60KD_IMP 60Kd inner membrane protein.
Probab=100.00 E-value=0 Score=367.29 Aligned_cols=182 Identities=51% Similarity=0.944 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 01639999999999998889999999999988877888999997314511567899999998504878678899999999
Q gi|254780483|r 358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI 437 (581)
Q Consensus 358 ~NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~~i~ekyk~d~~~~~~~e~m~ly~~~~vnP~~GClP~l~q~ 437 (581)
T Consensus 1 ~sw~~sI~~~ti~vR~i~lPl~~~~~~~~~k~~~l~Pe~~~i~~k~~~~~-~~~~~e~~~lyk~~g~~p~~~~l~~liQ~ 79 (194)
T pfam02096 1 GNWGLAIILLTILVRLLLLPLTLKQYKSMAKMQELQPEIKEIQEKYKDDP-QKLQQEMMKLYKEHGVNPLKGCLPMLIQL 79 (194)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 96128999999999999999999999999999982586899987661447-99999999999994836788877899999
Q ss_pred HHHHHHHHHHHHHHHHCC---CCCCCCCCCCCCCC-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--
Q ss_conf 999999999987698628---87534100003357-256667641022220278999999999999999997528877--
Q gi|254780483|r 438 PVFFAIYKVISISLEMRH---APFWGWIKDLAAAD-PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP-- 511 (581)
Q Consensus 438 p~~~a~~~~~~~~ielr~---~~f~~Wi~dls~~d-~~~~~~~~~~~p~~~~~~~~~~ilp~l~~~~m~~~~k~~p~~-- 511 (581)
T Consensus 80 Pif~~~~~~ir~~~~~~~~~~~~~-lw~~dLt~~D~~~~-------------------iLpii~~~~~~~~~~~~~~~~~ 139 (194)
T pfam02096 80 PIFFALYRVLRNMAELRGLETAGF-LWIKDLSAPDPPYF-------------------ILPILAGLTMFLQQKLSPKPQD 139 (194)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCC-CCCHHCCCCCCHHH-------------------HHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999998653002775-67020389860069-------------------9999999999999996656778
Q ss_pred -CCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf -468----9999999968999999987879999999999999999999998747
Q gi|254780483|r 512 -ADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH 560 (581)
Q Consensus 512 -~d~----~q~~~~~~mp~~~~~~~~~~~~gl~~y~~~~~~~~~~qq~~i~~~~ 560 (581)
T Consensus 140 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~Paal~lYW~~s~~~sl~Q~~il~~~~ 193 (194)
T pfam02096 140 PTDKQQSPQMKIMMYIMPLIFLFFFLNFPAGLVLYWIVSNLFSLVQQLLIRKPL 193 (194)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 776146899999999999999999997899999999998999999999981678