HHsearch alignment for GI: 254780483 and conserved domain: pfam02096

>pfam02096 60KD_IMP 60Kd inner membrane protein.
Probab=100.00  E-value=0  Score=367.29  Aligned_cols=182  Identities=51%  Similarity=0.944  Sum_probs=164.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             01639999999999998889999999999988877888999997314511567899999998504878678899999999
Q gi|254780483|r  358 GNFGIAIMLTTVFVKLLFFPLAKKQYVSTANMKNIQPKIDELREKFKQSPPQVLQKAMIQLYKTHNINPLAGCWPILLQI  437 (581)
Q Consensus       358 ~NyGiaIIllTilikli~~PLt~ks~~Sm~kM~~lqP~i~~i~ekyk~d~~~~~~~e~m~ly~~~~vnP~~GClP~l~q~  437 (581)
T Consensus         1 ~sw~~sI~~~ti~vR~i~lPl~~~~~~~~~k~~~l~Pe~~~i~~k~~~~~-~~~~~e~~~lyk~~g~~p~~~~l~~liQ~   79 (194)
T pfam02096         1 GNWGLAIILLTILVRLLLLPLTLKQYKSMAKMQELQPEIKEIQEKYKDDP-QKLQQEMMKLYKEHGVNPLKGCLPMLIQL   79 (194)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             96128999999999999999999999999999982586899987661447-99999999999994836788877899999


Q ss_pred             HHHHHHHHHHHHHHHHCC---CCCCCCCCCCCCCC-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC--
Q ss_conf             999999999987698628---87534100003357-256667641022220278999999999999999997528877--
Q gi|254780483|r  438 PVFFAIYKVISISLEMRH---APFWGWIKDLAAAD-PTNIFTLFGILPFYLPGFMHVGIWPIIMSLSMFIQMKMSPPP--  511 (581)
Q Consensus       438 p~~~a~~~~~~~~ielr~---~~f~~Wi~dls~~d-~~~~~~~~~~~p~~~~~~~~~~ilp~l~~~~m~~~~k~~p~~--  511 (581)
T Consensus        80 Pif~~~~~~ir~~~~~~~~~~~~~-lw~~dLt~~D~~~~-------------------iLpii~~~~~~~~~~~~~~~~~  139 (194)
T pfam02096        80 PIFFALYRVLRNMAELRGLETAGF-LWIKDLSAPDPPYF-------------------ILPILAGLTMFLQQKLSPKPQD  139 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCC-CCCHHCCCCCCHHH-------------------HHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999999999999998653002775-67020389860069-------------------9999999999999996656778


Q ss_pred             -CCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             -468----9999999968999999987879999999999999999999998747
Q gi|254780483|r  512 -ADK----GQAMILNWMPVVFVFALSSFPAGLIIYWSWSNVISIVQQAVIMKMH  560 (581)
Q Consensus       512 -~d~----~q~~~~~~mp~~~~~~~~~~~~gl~~y~~~~~~~~~~qq~~i~~~~  560 (581)
T Consensus       140 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~Paal~lYW~~s~~~sl~Q~~il~~~~  193 (194)
T pfam02096       140 PTDKQQSPQMKIMMYIMPLIFLFFFLNFPAGLVLYWIVSNLFSLVQQLLIRKPL  193 (194)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             776146899999999999999999997899999999998999999999981678