HHsearch results for GI: 254780483 and protein with PDBid: 3blc_A
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic domain, transmembrane, chaperone; 2.50A {Escherichia coli K12}
Probab=100.00 E-value=2e-41 Score=319.26 Aligned_cols=277 Identities=16% Similarity=0.306 Sum_probs=213.8
Q ss_pred CCCCCEEEEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCC-CCCCCCCCCCEE
Q ss_conf 1458728997664999997699559999953571344788772688545666553100000134787-754333432100
Q gi|254780483|r 65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWN 143 (581)
Q Consensus 65 ~~~~~~I~Iend~l~i~is~~GG~I~~~~LK~Y~~~~~~ds~~v~Ll~~~~~~~~y~~~~G~~~~~~-~~~~p~~~~~~~ 143 (581)
..+++.|+||||+++++||++||+|++++||+|+...+++. ++.|++. +..+.|++.+|++.... +...+..++.|+
T Consensus 31 ~~~~~~itiend~~~~~~ss~GG~I~~~~Lk~y~~~~~~~~-~l~l~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 108 (330)
T 3blc_A 31 SGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLET-SPQFIYQAQSGLTGRDGPDNPANGPRPLYN 108 (330)
T ss_dssp --CCCEEEEECSSCEEEEETBTCCEEEEEEEEEESSTTCSS-EEEEEEE-CSSCEEEEEEEEESTTCTTSGGGCSCCBCB
T ss_pred CCCCCEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCC-CEEECCC-CCCCCEEEECCCCCCCCCCCCCCCCCCEEE
T ss_conf 67767799988849999989998897998778854447998-5375467-765430111253003686656777652044
Q ss_pred CCCCCC----CCCCCCCEEEEECCCCEEEEEEEEEC-CCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCC-----CCCC
Q ss_conf 156665----66666504774158842699999716-8835899986315766642224210120256865-----4442
Q gi|254780483|r 144 LISGKI----LTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT-----ATNT 213 (581)
Q Consensus 144 ~~~~~~----l~~~~~v~l~~~~~~g~~i~kt~t~~-~~Y~i~i~~~v~N~s~~~i~~~~~~~i~r~~~~~-----~~~~ 213 (581)
...... ..+...+++++.+++|+.++|+|+++ ++|+++++.+++|.+..++.+.++..+.+..... ....
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~k~y~~~~~~y~i~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T 3blc_A 109 VEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSN 188 (330)
T ss_dssp CSCSEEECCTTCCEEEEEEEEECTTSCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEEEEEEEEEESSCCCCC------
T ss_pred ECCCEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
T ss_conf 13653672257877369999746996599999973698637999999851667764334101001346676556555553
Q ss_pred C--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEC
Q ss_conf 0--01100000156543210013333333222332346357873110589996078984158998316766410222202
Q gi|254780483|r 214 F--GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA 291 (581)
Q Consensus 214 ~--~~~~g~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~Wva~~qkYF~salIP~~~~~~~~~~~~~~~~~~~y~~~~~~ 291 (581)
+ ..+.+......++..++..+++.++++.....++.+|+|++||||+++++|+++......... ..+..+.+++..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wva~~~kYF~s~lip~~~~~~~~~~~~--~~~~~~~~~~~~ 266 (330)
T 3blc_A 189 FALHTFRGAAYSTPDAAYAAYAFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTAN--LGNGIAAIGYKS 266 (330)
T ss_dssp ----CCEEEEEECSSCSSCEECHHHHHTTCCCEEEESSCEEEEEESSEEEEEEEESSSCEEEEEEE--EETTEEEEEEEC
T ss_pred CEEEECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCEEEEEE--CCCCEEEEEEEC
T ss_conf 102321341277157651342244322123211025674587715657999931688741245540--689616999855
Q ss_pred CCCCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 44445788603678998850002788763220146310123332011035689999999
Q gi|254780483|r 292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM 350 (581)
Q Consensus 292 ~~~~i~pg~~~~~~~~lY~GPk~~~~L~~~~~~l~~~~l~~~vd~Gwf~~i~kplf~~L 350 (581)
+..+++||++.+.++++|+|||+|++|++++.+ ||++||||||+||+||||..+
T Consensus 267 ~~~~l~pg~~~~~~~~~Y~GPk~y~~L~~~~~~-----le~~id~GWf~fIakPlf~~~ 320 (330)
T 3blc_A 267 QPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPH-----LDLTVDYGWLWFISQPLLVPR 320 (330)
T ss_dssp CCEEECTTCEEEEEEEEEEEECCHHHHHHHSTT-----CCCHHHHHHHHHHTSCCCCCC
T ss_pred CCEEECCCCEEEEEEEEEECCCCHHHHHHHHCC-----HHHEEECCCHHHHHHHHEEEC
T ss_conf 746878997478998999850819999866509-----211683421988543155066