HHsearch results for GI: 254780483 and protein with PDBid: 3blc_A

>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic domain, transmembrane, chaperone; 2.50A {Escherichia coli K12}
Probab=100.00  E-value=2e-41  Score=319.26  Aligned_cols=277  Identities=16%  Similarity=0.306  Sum_probs=213.8

Q ss_pred             CCCCCEEEEECCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCC-CCCCCCCCCCEE
Q ss_conf             1458728997664999997699559999953571344788772688545666553100000134787-754333432100
Q gi|254780483|r   65 LSMSPRVELKNPSLIGSINLKGAQFDDLNLRGYHLDVSSNSPIVTLLSPSNTKNAYFAELDYVSTAN-NIELPNSNTVWN  143 (581)
Q Consensus        65 ~~~~~~I~Iend~l~i~is~~GG~I~~~~LK~Y~~~~~~ds~~v~Ll~~~~~~~~y~~~~G~~~~~~-~~~~p~~~~~~~  143 (581)
                      ..+++.|+||||+++++||++||+|++++||+|+...+++. ++.|++. +..+.|++.+|++.... +...+..++.|+
T Consensus        31 ~~~~~~itiend~~~~~~ss~GG~I~~~~Lk~y~~~~~~~~-~l~l~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  108 (330)
T 3blc_A           31 SGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLET-SPQFIYQAQSGLTGRDGPDNPANGPRPLYN  108 (330)
T ss_dssp             --CCCEEEEECSSCEEEEETBTCCEEEEEEEEEESSTTCSS-EEEEEEE-CSSCEEEEEEEEESTTCTTSGGGCSCCBCB
T ss_pred             CCCCCEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCC-CEEECCC-CCCCCEEEECCCCCCCCCCCCCCCCCCEEE
T ss_conf             67767799988849999989998897998778854447998-5375467-765430111253003686656777652044


Q ss_pred             CCCCCC----CCCCCCCEEEEECCCCEEEEEEEEEC-CCCEEEEEEEECCCCCCCCCCCCCEEEECCCCCC-----CCCC
Q ss_conf             156665----66666504774158842699999716-8835899986315766642224210120256865-----4442
Q gi|254780483|r  144 LISGKI----LTPTTPIKLVFKNANNILFERTISLD-EHYLFKIVDTVTNNSIDQIRFSPRGRIMRHKPQT-----ATNT  213 (581)
Q Consensus       144 ~~~~~~----l~~~~~v~l~~~~~~g~~i~kt~t~~-~~Y~i~i~~~v~N~s~~~i~~~~~~~i~r~~~~~-----~~~~  213 (581)
                      ......    ..+...+++++.+++|+.++|+|+++ ++|+++++.+++|.+..++.+.++..+.+.....     ....
T Consensus       109 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~k~y~~~~~~y~i~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (330)
T 3blc_A          109 VEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSN  188 (330)
T ss_dssp             CSCSEEECCTTCCEEEEEEEEECTTSCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEEEEEEEEEESSCCCCC------
T ss_pred             ECCCEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
T ss_conf             13653672257877369999746996599999973698637999999851667764334101001346676556555553


Q ss_pred             C--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEC
Q ss_conf             0--01100000156543210013333333222332346357873110589996078984158998316766410222202
Q gi|254780483|r  214 F--GVQEGFIAVLGDKSLVEQKYSDIEKSSISNFHESNSWLGISDKYWASVFIPSKETSFHSQFKYLSDGHARYQAKFSA  291 (581)
Q Consensus       214 ~--~~~~g~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~Wva~~qkYF~salIP~~~~~~~~~~~~~~~~~~~y~~~~~~  291 (581)
                      +  ..+.+......++..++..+++.++++.....++.+|+|++||||+++++|+++.........  ..+..+.+++..
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wva~~~kYF~s~lip~~~~~~~~~~~~--~~~~~~~~~~~~  266 (330)
T 3blc_A          189 FALHTFRGAAYSTPDAAYAAYAFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTAN--LGNGIAAIGYKS  266 (330)
T ss_dssp             ----CCEEEEEECSSCSSCEECHHHHHTTCCCEEEESSCEEEEEESSEEEEEEEESSSCEEEEEEE--EETTEEEEEEEC
T ss_pred             CEEEECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCCCEEEEEE--CCCCEEEEEEEC
T ss_conf             102321341277157651342244322123211025674587715657999931688741245540--689616999855


Q ss_pred             CCCCCCCCCEEEEEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf             44445788603678998850002788763220146310123332011035689999999
Q gi|254780483|r  292 NEITILPGKSITTTNFLFAGAKEFPTIHHYEKDLAIPRFEMLIDWGWFYFIAKPMFMLM  350 (581)
Q Consensus       292 ~~~~i~pg~~~~~~~~lY~GPk~~~~L~~~~~~l~~~~l~~~vd~Gwf~~i~kplf~~L  350 (581)
                      +..+++||++.+.++++|+|||+|++|++++.+     ||++||||||+||+||||..+
T Consensus       267 ~~~~l~pg~~~~~~~~~Y~GPk~y~~L~~~~~~-----le~~id~GWf~fIakPlf~~~  320 (330)
T 3blc_A          267 QPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPH-----LDLTVDYGWLWFISQPLLVPR  320 (330)
T ss_dssp             CCEEECTTCEEEEEEEEEEEECCHHHHHHHSTT-----CCCHHHHHHHHHHTSCCCCCC
T ss_pred             CCEEECCCCEEEEEEEEEECCCCHHHHHHHHCC-----HHHEEECCCHHHHHHHHEEEC
T ss_conf             746878997478998999850819999866509-----211683421988543155066