HHsearch alignment for GI: 254780484 and conserved domain: CHL00189
>CHL00189 infB translation initiation factor 2; Provisional.
Probab=99.86 E-value=6.9e-21 Score=139.22 Aligned_cols=162 Identities=21% Similarity=0.300 Sum_probs=124.8
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 68689997489988989999973897379873888414521202665556785089649999760010111224478988
Q gi|254780484|r 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSW 107 (212)
Q Consensus 28 ~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~ 107 (212)
T Consensus 271 RpPVVTIMGHVDHGKTsLLD~iR~t~Va--~~EaGGITQhIGAy~V~~~--~~~~~~~ITFlDTPGHeAFt--------- 337 (770)
T CHL00189 271 RPPIVTILGHVDHGKTTLLDAIRKTNIA--QKEAGGITQKIGAYEVEVP--YKDQNQKIVFLDTPGHEAFS--------- 337 (770)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCCCCEECEEEEEEC--CCCCCCEEEEECCCCHHHHH---------
T ss_conf 8998998577257720378888528851--3456765550352999751--57889758995599468899---------
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 88998777766420000011223578875454554321025753221222211110--2468999999999975313689
Q gi|254780484|r 108 GGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLS--PTTAQETLEKTKYLIRNYPTAH 185 (212)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~--~~~~~~~~~~~~~~~~~~~~~~ 185 (212)
T Consensus 338 ----~MRaRGA~vTDIvILVVAADDGVmPQTiEAI~hakaA~VPiIVAINKiDkp~an~~rVk~eL~e~-gli~EewGGd 412 (770)
T CHL00189 338 ----SMRSRGANVTDIAILIVAADDGVKPQTIEAINHIQAANVPIIVAINKIDKENANIDRVKQELSKY-NLISEKWGGQ 412 (770)
T ss_pred ----HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHC-CCCHHHCCCC
T ss_conf ----99862786666799999657885672799999998769988999877458998857899999986-9552223795
Q ss_pred CCEEEEECCCCCCHHHHHHHHH
Q ss_conf 8689998888899899999999
Q gi|254780484|r 186 PEVIPTSSVKRKGIEVLRKAIL 207 (212)
Q Consensus 186 ~~i~~vSA~~g~Gi~eL~~~I~ 207 (212)
T Consensus 413 ~~~V~ISAktg~gId~LLE~Il 434 (770)
T CHL00189 413 TPMIPISALQGTNIDKLLEMIL 434 (770)
T ss_pred EEEEEEEECCCCCHHHHHHHHH
T ss_conf 5999966167988799999999