HHsearch alignment for GI: 254780484 and conserved domain: COG0486

>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=99.95  E-value=4.3e-27  Score=174.87  Aligned_cols=161  Identities=24%  Similarity=0.285  Sum_probs=125.8

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf             68689997489988989999973897379873888414521202665556785089649999760010111224478988
Q gi|254780484|r   28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSW  107 (212)
Q Consensus        28 ~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~  107 (212)
T Consensus       216 ~G~kvvIiG~PNvGKSSLLNaL~~~d~-AIVTdI~GTTRDv------iee~i~i~G~pv~l~DTAGiRet~d~VE~iGIe  288 (454)
T COG0486         216 EGLKVVIIGRPNVGKSSLLNALLGRDR-AIVTDIAGTTRDV------IEEDINLNGIPVRLVDTAGIRETDDVVERIGIE  288 (454)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCC-EEECCCCCCCCCE------EEEEEEECCEEEEEEECCCCCCCCCHHHHHHHH
T ss_conf             586499987998867999998866786-6742899974103------789999898899998567766673489999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             88998777766420000011223578875454554321025753221222211110246899999999997531368986
Q gi|254780484|r  108 GGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPE  187 (212)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (212)
T Consensus       289 -----Rs~~~i~~ADlvL~v~D~~~~~~~~d~~~~~-~~~~~~~~i~v~NK~DL~~~~~~~~~----------~~~~~~~  352 (454)
T COG0486         289 -----RAKKAIEEADLVLFVLDASQPLDKEDLALIE-LLPKKKPIIVVLNKADLVSKIELESE----------KLANGDA  352 (454)
T ss_pred             -----HHHHHHHHCCEEEEEEECCCCCCHHHHHHHH-HCCCCCCEEEEEECHHCCCCCCCCHH----------HCCCCCC
T ss_conf             -----9999998599899997088777601177887-24368977999960211564321012----------0267882


Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf             899988888998999999998728
Q gi|254780484|r  188 VIPTSSVKRKGIEVLRKAILETIN  211 (212)
Q Consensus       188 i~~vSA~~g~Gi~eL~~~I~~~l~  211 (212)
T Consensus       353 ~i~iSa~t~~Gl~~L~~~i~~~~~  376 (454)
T COG0486         353 IISISAKTGEGLDALREAIKQLFG  376 (454)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             699982576579999999999986