HHsearch alignment for GI: 254780484 and conserved domain: COG1217
>COG1217 TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].
Probab=99.34 E-value=1.3e-11 Score=85.86 Aligned_cols=169 Identities=18% Similarity=0.221 Sum_probs=119.9
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC--------EEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHH
Q ss_conf 686899974899889899999738973--------798738884145212026655567850896499997600101112
Q gi|254780484|r 28 GPPEIAFSGRSNVGKSSLINILVNRKN--------LARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA 99 (212)
Q Consensus 28 ~~p~VaivG~~NvGKSSLiNaL~g~~~--------~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~ 99 (212)
T Consensus 4 ~iRNIAIIAHVDHGKTTLVD~LLkQSGtf~~~e~v~ERvMDSnDlEkERGITILaKnTav~~~~~~INIvDTPGHADFGG 83 (603)
T COG1217 4 DIRNIAIIAHVDHGKTTLVDALLKQSGTFREREEVAERVMDSNDLEKERGITILAKNTAVNYNGTRINIVDTPGHADFGG 83 (603)
T ss_pred CCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHCCCEEEECCCEEECCCEEEEEECCCCCCCCCC
T ss_conf 65306899984488102899998731654456520144037642344349389851524620883898765898677662
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 24478988889987777664200000112235788754545543210257532212222111102468999999999975
Q gi|254780484|r 100 PKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIR 179 (212)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~ 179 (212)
T Consensus 84 EVERv-------------l~MVDgvlLlVDA~EGpMPQTrFVlkKAl~~gL~PIVVvNKiDrp~-Arp~~Vvd~vfDLf~ 149 (603)
T COG1217 84 EVERV-------------LSMVDGVLLLVDASEGPMPQTRFVLKKALALGLKPIVVINKIDRPD-ARPDEVVDEVFDLFV 149 (603)
T ss_pred HHHHH-------------HHHCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC-CCHHHHHHHHHHHHH
T ss_conf 54511-------------4323348999975558887314448999974998489996778999-887899999999999
Q ss_pred HCC----CCCCCEEEEECCCCC----------CHHHHHHHHHHHH
Q ss_conf 313----689868999888889----------9899999999872
Q gi|254780484|r 180 NYP----TAHPEVIPTSSVKRK----------GIEVLRKAILETI 210 (212)
Q Consensus 180 ~~~----~~~~~i~~vSA~~g~----------Gi~eL~~~I~~~l 210 (212)
T Consensus 150 ~L~A~deQLdFPivYAS~~~G~a~~~~~~~~~~m~pLfe~I~~hv 194 (603)
T COG1217 150 ELGATDEQLDFPIVYASARNGTASLDPEDEADDMAPLFETILDHV 194 (603)
T ss_pred HHCCCHHHCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHC
T ss_conf 819974557870798541475101586555553168999999758