HHsearch alignment for GI: 254780484 and conserved domain: COG5256
>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis].
Probab=99.40 E-value=1.1e-11 Score=86.42 Aligned_cols=158 Identities=17% Similarity=0.261 Sum_probs=101.7
Q ss_pred EEEEECCCCCCHHHHHHHHHC---------------------CC--CEEEECCCCCEEEECCEEEEEEEEEEEECCCEEE
Q ss_conf 899974899889899999738---------------------97--3798738884145212026655567850896499
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVN---------------------RK--NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA 87 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g---------------------~~--~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~ 87 (212)
T Consensus 9 nl~~iGHVD~GKSTl~GrLly~~G~id~~tmeK~~~ea~~~gK~sf~fawvlD~tkeERerGvTi~~~~~~fet~k~~~t 88 (428)
T COG5256 9 NLVFIGHVDAGKSTLVGRLLYDLGEIDKRTMEKLEKEAKELGKESFKFAWVLDKTKEERERGVTIDVAHSKFETDKYNFT 88 (428)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCEEEEEEEEEEECCCCEEE
T ss_conf 89998378787034455657773797989999999999861977168999853886678666689977788643770589
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------CCHHHHHHHHHHCCCCCC-CCCCCCCC
Q ss_conf 9976001011122447898888998777766420000011223578-------875454554321025753-22122221
Q gi|254780484|r 88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG-------VKQIDQDVFSFLDKKAVS-YQIVLTKI 159 (212)
Q Consensus 88 ~~DtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~v~nK~ 159 (212)
T Consensus 89 IiDaPGHrdFvkn-------------mItGasqAD~aVLVV~a~~~efE~g~~~~gQtrEH~~La~tlGi~~lIVavNKM 155 (428)
T COG5256 89 IIDAPGHRDFVKN-------------MITGASQADVAVLVVDARDGEFEAGFGVGGQTREHAFLARTLGIKQLIVAVNKM 155 (428)
T ss_pred EEECCCHHHHHHH-------------HHCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 9607846778987-------------631331336799999888983101436587516789999856975699999715
Q ss_pred CCCCH--HHHHHHHHHHHHHHHHCCCC--CCCEEEEECCCCCCHHH
Q ss_conf 11102--46899999999997531368--98689998888899899
Q gi|254780484|r 160 DKLSP--TTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEV 201 (212)
Q Consensus 160 D~~~~--~~~~~~~~~~~~~~~~~~~~--~~~i~~vSA~~g~Gi~e 201 (212)
T Consensus 156 D~v~wde~rf~ei~~~v~~l~k~~G~~~~~v~FIPiSg~~G~Nl~~ 201 (428)
T COG5256 156 DLVSWDEERFEEIVSEVSKLLKMVGYNPKDVPFIPISGFKGDNLTK 201 (428)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
T ss_conf 6666279999999999999999719986677079622446776332