HHsearch alignment for GI: 254780484 and conserved domain: COG5256

>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis].
Probab=99.40  E-value=1.1e-11  Score=86.42  Aligned_cols=158  Identities=17%  Similarity=0.261  Sum_probs=101.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHC---------------------CC--CEEEECCCCCEEEECCEEEEEEEEEEEECCCEEE
Q ss_conf             899974899889899999738---------------------97--3798738884145212026655567850896499
Q gi|254780484|r   31 EIAFSGRSNVGKSSLINILVN---------------------RK--NLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMA   87 (212)
Q Consensus        31 ~VaivG~~NvGKSSLiNaL~g---------------------~~--~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~   87 (212)
T Consensus         9 nl~~iGHVD~GKSTl~GrLly~~G~id~~tmeK~~~ea~~~gK~sf~fawvlD~tkeERerGvTi~~~~~~fet~k~~~t   88 (428)
T COG5256           9 NLVFIGHVDAGKSTLVGRLLYDLGEIDKRTMEKLEKEAKELGKESFKFAWVLDKTKEERERGVTIDVAHSKFETDKYNFT   88 (428)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCEEEEEEEEEEECCCCEEE
T ss_conf             89998378787034455657773797989999999999861977168999853886678666689977788643770589


Q ss_pred             EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-------CCHHHHHHHHHHCCCCCC-CCCCCCCC
Q ss_conf             9976001011122447898888998777766420000011223578-------875454554321025753-22122221
Q gi|254780484|r   88 LVDMPGYGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHG-------VKQIDQDVFSFLDKKAVS-YQIVLTKI  159 (212)
Q Consensus        88 ~~DtpG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~~v~nK~  159 (212)
T Consensus        89 IiDaPGHrdFvkn-------------mItGasqAD~aVLVV~a~~~efE~g~~~~gQtrEH~~La~tlGi~~lIVavNKM  155 (428)
T COG5256          89 IIDAPGHRDFVKN-------------MITGASQADVAVLVVDARDGEFEAGFGVGGQTREHAFLARTLGIKQLIVAVNKM  155 (428)
T ss_pred             EEECCCHHHHHHH-------------HHCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECC
T ss_conf             9607846778987-------------631331336799999888983101436587516789999856975699999715


Q ss_pred             CCCCH--HHHHHHHHHHHHHHHHCCCC--CCCEEEEECCCCCCHHH
Q ss_conf             11102--46899999999997531368--98689998888899899
Q gi|254780484|r  160 DKLSP--TTAQETLEKTKYLIRNYPTA--HPEVIPTSSVKRKGIEV  201 (212)
Q Consensus       160 D~~~~--~~~~~~~~~~~~~~~~~~~~--~~~i~~vSA~~g~Gi~e  201 (212)
T Consensus       156 D~v~wde~rf~ei~~~v~~l~k~~G~~~~~v~FIPiSg~~G~Nl~~  201 (428)
T COG5256         156 DLVSWDEERFEEIVSEVSKLLKMVGYNPKDVPFIPISGFKGDNLTK  201 (428)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
T ss_conf             6666279999999999999999719986677079622446776332