HHsearch alignment for GI: 254780484 and conserved domain: PRK00741
>PRK00741 prfC peptide chain release factor 3; Provisional.
Probab=99.50 E-value=9.4e-13 Score=92.44 Aligned_cols=122 Identities=14% Similarity=0.210 Sum_probs=83.6
Q ss_pred CCCEEEEECCCCCCHHHHHHHHH---CC-CCEEEE----CCCCCEE------EECCEEEEEEEEEEEECCCEEEEEECCH
Q ss_conf 68689997489988989999973---89-737987----3888414------5212026655567850896499997600
Q gi|254780484|r 28 GPPEIAFSGRSNVGKSSLINILV---NR-KNLART----SNAPGRT------QHLNFFVPKDFSNLKNNLPAMALVDMPG 93 (212)
Q Consensus 28 ~~p~VaivG~~NvGKSSLiNaL~---g~-~~~a~~----~~~p~tt------~~~~~~~~~~~~~~~~~~~~~~~~DtpG 93 (212)
T Consensus 9 ~~RniaIi~H~dAGKTTLtE~lL~~~GaI~~~G~V~~~~~~~~~~sD~~~~E~~RgiSI~ssv~~~e~~~~~iNliDTPG 88 (526)
T PRK00741 9 KRRTFAIISHPDAGKTTLTEKLLLFGGAIQEAGTVKGRKSGRHATSDWMEMEKQRGISVTSSVMQFPYRDCLINLLDTPG 88 (526)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCEEECCEEEEEECCEEEEEEECCC
T ss_conf 11779999378989899999999746752448466314678864678858899759648615177867898999990989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 101112244789888899877776642000001122357887545455432102575322122221111
Q gi|254780484|r 94 YGYARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKL 162 (212)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~ 162 (212)
T Consensus 89 h~DF~~-------------e~~raL~a~D~Av~Vida~~GVe~qTe~~w~~~~~~~iP~i~FINKmDR~ 144 (526)
T PRK00741 89 HEDFSE-------------DTYRTLTAVDSALMVIDAAKGVEPQTRKLMEVCRLRDTPIFTFINKLDRD 144 (526)
T ss_pred CHHHHH-------------HHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf 467789-------------99999987375999997775523336899999886399889999656767