HHsearch alignment for GI: 254780484 and conserved domain: PRK04004
>PRK04004 translation initiation factor IF-2; Validated.
Probab=99.83 E-value=1.5e-19 Score=131.55 Aligned_cols=165 Identities=18% Similarity=0.232 Sum_probs=118.7
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEE------------EECCCEEEEEECCHHH
Q ss_conf 6868999748998898999997389737987388841452120266555678------------5089649999760010
Q gi|254780484|r 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL------------KNNLPAMALVDMPGYG 95 (212)
Q Consensus 28 ~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~------------~~~~~~~~~~DtpG~~ 95 (212)
T Consensus 4 R~PIvtimGHVDhGKTsLLD~iR~t~V~--~~EaGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipgllfiDTPGHe 81 (592)
T PRK04004 4 RQPIVVVLGHVDHGKTTLLDKIRGTAVA--AKEAGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPGLLFIDTPGHE 81 (592)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCHH
T ss_conf 8988999787377763689998628773--55577623230659841231011034433443323456775576599659
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCH-----------
Q ss_conf 111224478988889987777664200000112235788754545543210257532212222111102-----------
Q gi|254780484|r 96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP----------- 164 (212)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~----------- 164 (212)
T Consensus 82 aFt-------------~mR~RGa~vtDiaILVVa~~dGv~pQT~EaI~~~k~~~vP~IVAiNKiDr~~gw~~~~~~~~~~ 148 (592)
T PRK04004 82 AFS-------------NLRKRGGALADIAILVVDINEGFQPQTIESLNILKSRKTPFVVAANKIDRIPGWKSVEGAPFLE 148 (592)
T ss_pred HHH-------------HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHH
T ss_conf 999-------------9997367457889999977888676279999999975998899986223566677676741123
Q ss_pred ------HHH----HHHHHHHHHHHHHC------------CCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf ------468----99999999997531------------36898689998888899899999999
Q gi|254780484|r 165 ------TTA----QETLEKTKYLIRNY------------PTAHPEVIPTSSVKRKGIEVLRKAIL 207 (212)
Q Consensus 165 ------~~~----~~~~~~~~~~~~~~------------~~~~~~i~~vSA~~g~Gi~eL~~~I~ 207 (212)
T Consensus 149 ~~~~q~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGeGi~dLL~~i~ 213 (592)
T PRK04004 149 SFKKQSERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGEGIPDLLMVLA 213 (592)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 22317388999998888888899987287632214543458814899782056899899999999