HHsearch alignment for GI: 254780484 and conserved domain: PRK04004

>PRK04004 translation initiation factor IF-2; Validated.
Probab=99.83  E-value=1.5e-19  Score=131.55  Aligned_cols=165  Identities=18%  Similarity=0.232  Sum_probs=118.7

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEE------------EECCCEEEEEECCHHH
Q ss_conf             6868999748998898999997389737987388841452120266555678------------5089649999760010
Q gi|254780484|r   28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNL------------KNNLPAMALVDMPGYG   95 (212)
Q Consensus        28 ~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~------------~~~~~~~~~~DtpG~~   95 (212)
T Consensus         4 R~PIvtimGHVDhGKTsLLD~iR~t~V~--~~EaGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipgllfiDTPGHe   81 (592)
T PRK04004          4 RQPIVVVLGHVDHGKTTLLDKIRGTAVA--AKEAGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPGLLFIDTPGHE   81 (592)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCHH
T ss_conf             8988999787377763689998628773--55577623230659841231011034433443323456775576599659


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCH-----------
Q ss_conf             111224478988889987777664200000112235788754545543210257532212222111102-----------
Q gi|254780484|r   96 YARAPKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP-----------  164 (212)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~-----------  164 (212)
T Consensus        82 aFt-------------~mR~RGa~vtDiaILVVa~~dGv~pQT~EaI~~~k~~~vP~IVAiNKiDr~~gw~~~~~~~~~~  148 (592)
T PRK04004         82 AFS-------------NLRKRGGALADIAILVVDINEGFQPQTIESLNILKSRKTPFVVAANKIDRIPGWKSVEGAPFLE  148 (592)
T ss_pred             HHH-------------HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHH
T ss_conf             999-------------9997367457889999977888676279999999975998899986223566677676741123


Q ss_pred             ------HHH----HHHHHHHHHHHHHC------------CCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf             ------468----99999999997531------------36898689998888899899999999
Q gi|254780484|r  165 ------TTA----QETLEKTKYLIRNY------------PTAHPEVIPTSSVKRKGIEVLRKAIL  207 (212)
Q Consensus       165 ------~~~----~~~~~~~~~~~~~~------------~~~~~~i~~vSA~~g~Gi~eL~~~I~  207 (212)
T Consensus       149 ~~~~q~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGeGi~dLL~~i~  213 (592)
T PRK04004        149 SFKKQSERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGEGIPDLLMVLA  213 (592)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf             22317388999998888888899987287632214543458814899782056899899999999