HHsearch alignment for GI: 254780484 and conserved domain: PRK09563
>PRK09563 rbgA ribosomal biogenesis GTPase; Reviewed.
Probab=97.95 E-value=7.9e-05 Score=46.89 Aligned_cols=85 Identities=13% Similarity=0.135 Sum_probs=62.3
Q ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
Q ss_conf 66420000011223578875454554321025753221222211110246899999999997531368986899988888
Q gi|254780484|r 117 ERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKR 196 (212)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vSA~~g 196 (212)
T Consensus 21 ~l~~~DvileV~DAR~Pl~~~n~~l~~~~--~~K~~ilvlNK~DL~~~~~~~~w----~~~~~---~~~~~~~~~sa~~~ 91 (282)
T PRK09563 21 NLKKVDVVIEVLDARIPLSSENPMIDKII--GNKPRLLVLNKSDLADPEVTKKW----IEYFE---EQGVKALAINAKEG 91 (282)
T ss_pred HHHHCCEEEEEEECCCCCCCCCHHHHHHH--CCCCEEEEEECCCCCCHHHHHHH----HHHHH---HCCCCEEEEECCCC
T ss_conf 98769999999765477675887599997--68976999755548899999999----99997---04995699746674
Q ss_pred CCHHHHHHHHHHHH
Q ss_conf 99899999999872
Q gi|254780484|r 197 KGIEVLRKAILETI 210 (212)
Q Consensus 197 ~Gi~eL~~~I~~~l 210 (212)
T Consensus 92 ~~~~~l~~~~~~~~ 105 (282)
T PRK09563 92 QGVKKILKAAKKLG 105 (282)
T ss_pred CCHHHHHHHHHHHH
T ss_conf 33889999999999