HHsearch alignment for GI: 254780484 and conserved domain: PRK12289

Probab=98.66  E-value=4.5e-08  Score=65.57  Aligned_cols=102  Identities=21%  Similarity=0.093  Sum_probs=49.0

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCE--EEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             8999748998898999997389737--98738884145212026655567850896499997600101112244789888
Q gi|254780484|r   31 EIAFSGRSNVGKSSLINILVNRKNL--ARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWG  108 (212)
Q Consensus        31 ~VaivG~~NvGKSSLiNaL~g~~~~--a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~  108 (212)
T Consensus       173 ~tv~~G~SGVGKSSLIN~L~p~~~l~TgeVS~k~~rGrH--TTr~~---eL~~L~~Gg~iiDTPGf~~~~l~~~~~eL~~  247 (351)
T PRK12289        173 ITVVAGPSGVGKSSLINRLIPDVELRVGEVSGKLQRGRH--TTRHV---ELFELPNGGLLADTPGFNQPDLDCSPEELAH  247 (351)
T ss_pred             EEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCC--CCCEE---EEEECCCCCEEEECCCCCCCCCCCCHHHHHH
T ss_conf             699981798878898876374123456654064899878--35516---8999489958997979887888779789988


Q ss_pred             HHHHHHH---HHHHHHCCCCCCCCCCCCCCHH
Q ss_conf             8998777---7664200000112235788754
Q gi|254780484|r  109 GLIVRYL---SERSTLRCVYLLIDCRHGVKQI  137 (212)
Q Consensus       109 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  137 (212)
T Consensus       248 ~FpE~~~~l~~~~CkF~dC~H~~EPgCaVk~a  279 (351)
T PRK12289        248 YFPEARQRLAQGNCQFNDCLHRDEPNCVVRGD  279 (351)
T ss_pred             HCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             46678844278996791998999999731378