HHsearch alignment for GI: 254780484 and conserved domain: PRK12312
>PRK12312 infB translation initiation factor IF-2; Provisional.
Probab=99.87 E-value=3.5e-21 Score=140.88 Aligned_cols=160 Identities=21% Similarity=0.316 Sum_probs=123.2
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 76686899974899889899999738973798738884145212026655567850896499997600101112244789
Q gi|254780484|r 26 KAGPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVD 105 (212)
Q Consensus 26 ~~~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~ 105 (212)
T Consensus 114 ~~R~PvVtimGHVDHGKTsLLD~iR~t~V~--~~EaGGITQhIGA~~v~------~~~~~itFiDTPGHeAFt------- 178 (610)
T PRK12312 114 EKRPPIVTIMGHVDHGKTTLLDTIRKTNVV--ASEAGGITQHIGAYQVE------YQGKKITFIDTPGHEAFT------- 178 (610)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCCCCCCCCEECEEEEE------ECCCEEEEECCCCHHHHH-------
T ss_conf 788998999677257722588998548641--34677664400449998------679768997289679899-------
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHCCC
Q ss_conf 88889987777664200000112235788754545543210257532212222111102--4689999999999753136
Q gi|254780484|r 106 SWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSP--TTAQETLEKTKYLIRNYPT 183 (212)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~--~~~~~~~~~~~~~~~~~~~ 183 (212)
T Consensus 179 ------~mR~RGa~vtDI~iLVVaaddGv~pQTiEaI~~ak~a~vpiiVAiNKiDkp~a~~~~v~~~L~~-~g~~~E~~G 251 (610)
T PRK12312 179 ------EMRARGAKVTDIVILVVAADDGVKPQTEEAIDHAKAANVPIIVFVNKMDKPNANPDRIKNELSK-YDLVPEEWG 251 (610)
T ss_pred ------HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH-HCCCHHHHC
T ss_conf ------9997077654579999975789774269999999975998899850446788987899999987-076678857
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 898689998888899899999999
Q gi|254780484|r 184 AHPEVIPTSSVKRKGIEVLRKAIL 207 (212)
Q Consensus 184 ~~~~i~~vSA~~g~Gi~eL~~~I~ 207 (212)
T Consensus 252 Gdv~~V~iSAktg~GId~LLe~Il 275 (610)
T PRK12312 252 GDTPFVYGSALKNEGIDELLDSIL 275 (610)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHH
T ss_conf 944599903687989999999999