HHsearch alignment for GI: 254780484 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=99.06 E-value=1.1e-09 Score=74.71 Aligned_cols=66 Identities=23% Similarity=0.238 Sum_probs=44.2
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHH-----HHH-------------------HHHHHCCCCCCCEEEEECCCCCCHHH
Q ss_conf 025753221222211110246899999-----999-------------------99753136898689998888899899
Q gi|254780484|r 146 DKKAVSYQIVLTKIDKLSPTTAQETLE-----KTK-------------------YLIRNYPTAHPEVIPTSSVKRKGIEV 201 (212)
Q Consensus 146 ~~~~~~~~~v~nK~D~~~~~~~~~~~~-----~~~-------------------~~~~~~~~~~~~i~~vSA~~g~Gi~e 201 (212)
T Consensus 179 G~mEiaDI~VVNKaD~~~a~~v~~~a~~~l~l~~esvqmlsqmthadearvq~G~~~~r~~gW~Ppv~~tsA~~G~Gi~E 258 (333)
T TIGR00750 179 GVMEIADIYVVNKADGEGAEEVKTLARLMLALDLESVQMLSQMTHADEARVQKGEIYRREKGWRPPVLKTSAVEGRGIDE 258 (333)
T ss_pred HHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCCCCCCHH
T ss_conf 43023248788168876658999999998888888999998653333444302655110105899638873356887167
Q ss_pred HHHHHHHHHC
Q ss_conf 9999998728
Q gi|254780484|r 202 LRKAILETIN 211 (212)
Q Consensus 202 L~~~I~~~l~ 211 (212)
T Consensus 259 L~daI~eH~~ 268 (333)
T TIGR00750 259 LWDAIEEHKK 268 (333)
T ss_pred HHHHHHHHHH
T ss_conf 8999999999