HHsearch alignment for GI: 254780484 and conserved domain: TIGR03596
>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF. Members of this protein family are GTP-binding proteins involved in ribosome biogenesis, including the essential YlqF protein of Bacillus subtilis, which is an essential protein. They are related to Era, EngA, and other GTPases of ribosome biogenesis, but are circularly permuted. This family is not universal, and is not present in Escherichia coli, and so is not as well studied as some other GTPases. This model is built for bacterial members.
Probab=99.50 E-value=4.1e-14 Score=100.27 Aligned_cols=61 Identities=34% Similarity=0.534 Sum_probs=48.1
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHH
Q ss_conf 86899974899889899999738973798738884145212026655567850896499997600101112
Q gi|254780484|r 29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARA 99 (212)
Q Consensus 29 ~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~ 99 (212)
T Consensus 118 ~i~v~vVG~PNVGKSSlIN~L~~~k-~~~v~~~PG~Tr~~q~i~--------l-~~~i~llDtPGvl~P~~ 178 (276)
T TIGR03596 118 PIRAMIVGIPNVGKSTLINRLAGKK-VAKVGNRPGVTKGQQWIK--------L-SDGLELLDTPGILWPKF 178 (276)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCC-EEEECCCCCCCCEEEEEE--------E-CCCEEEECCCCCCCCCC
T ss_conf 6389997279875899999873672-587779654210258999--------5-79779966887457887