HHsearch alignment for GI: 254780484 and conserved domain: cd01849
>cd01849 YlqF_related_GTPase YlqF-related GTPases. These proteins are found in bacteria, eukaryotes, and archaea. They all exhibit a circular permutation of the GTPase signature motifs so that the order of the conserved G box motifs is G4-G5-G1-G2-G3, with G4 and G5 being permuted from the C-terminal region of proteins in the Ras superfamily to the N-terminus of YlqF-related GTPases.
Probab=97.93 E-value=2.7e-05 Score=49.53 Aligned_cols=83 Identities=20% Similarity=0.221 Sum_probs=59.9
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
Q ss_conf 00001122357887545455432102-57532212222111102468999999999975313689868999888889989
Q gi|254780484|r 122 RCVYLLIDCRHGVKQIDQDVFSFLDK-KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE 200 (212)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vSA~~g~Gi~ 200 (212)
T Consensus 1 D~il~VvDaR~pl~~~~~~~~~~l~~~~~K~~ilvlNK~Dl~~~~~~~~w~----~~~~--~~~~~~~~~~S~~~~~~~~ 74 (155)
T cd01849 1 DVILEVLDARDPLGTRSPDIERVLIKEKGKKLILVLNKADLVPKEVLRKWL----AYLR--HSYPTIPFKISATNGQGIE 74 (155)
T ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH----HHHH--HCCCCCEEEHHHCCCCCHH
T ss_conf 989999968799998899999999865899489997673458989999999----9999--6299851671102674568
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999872
Q gi|254780484|r 201 VLRKAILETI 210 (212)
Q Consensus 201 eL~~~I~~~l 210 (212)
T Consensus 75 ~~~~~~~~~~ 84 (155)
T cd01849 75 KKESAFTKQT 84 (155)
T ss_pred HHHHHHHHHH
T ss_conf 8999999871