HHsearch alignment for GI: 254780484 and conserved domain: cd01849

>cd01849 YlqF_related_GTPase YlqF-related GTPases. These proteins are found in bacteria, eukaryotes, and archaea. They all exhibit a circular permutation of the GTPase signature motifs so that the order of the conserved G box motifs is G4-G5-G1-G2-G3, with G4 and G5 being permuted from the C-terminal region of proteins in the Ras superfamily to the N-terminus of YlqF-related GTPases.
Probab=97.93  E-value=2.7e-05  Score=49.53  Aligned_cols=83  Identities=20%  Similarity=0.221  Sum_probs=59.9

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHH
Q ss_conf             00001122357887545455432102-57532212222111102468999999999975313689868999888889989
Q gi|254780484|r  122 RCVYLLIDCRHGVKQIDQDVFSFLDK-KAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSSVKRKGIE  200 (212)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vSA~~g~Gi~  200 (212)
T Consensus         1 D~il~VvDaR~pl~~~~~~~~~~l~~~~~K~~ilvlNK~Dl~~~~~~~~w~----~~~~--~~~~~~~~~~S~~~~~~~~   74 (155)
T cd01849           1 DVILEVLDARDPLGTRSPDIERVLIKEKGKKLILVLNKADLVPKEVLRKWL----AYLR--HSYPTIPFKISATNGQGIE   74 (155)
T ss_pred             CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH----HHHH--HCCCCCEEEHHHCCCCCHH
T ss_conf             989999968799998899999999865899489997673458989999999----9999--6299851671102674568


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999872
Q gi|254780484|r  201 VLRKAILETI  210 (212)
Q Consensus       201 eL~~~I~~~l  210 (212)
T Consensus        75 ~~~~~~~~~~   84 (155)
T cd01849          75 KKESAFTKQT   84 (155)
T ss_pred             HHHHHHHHHH
T ss_conf             8999999871