HHsearch alignment for GI: 254780484 and conserved domain: cd01876
>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=100.00 E-value=7.3e-34 Score=213.82 Aligned_cols=170 Identities=47% Similarity=0.743 Sum_probs=132.9
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 89997489988989999973897379873888414521202665556785089649999760010111224478988889
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL 110 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~ 110 (212)
T Consensus 1 eIaivG~pN~GKSTL~N~L~~~~~~~~vs~~~gtTr~i~~~~~---------~~~~~~vDtPG~g~~~~~~~~~~~~~~~ 71 (170)
T cd01876 1 EIAFAGRSNVGKSSLINALTNRKKLARTSKTPGKTQLINFFNV---------NDKFRLVDLPGYGYAKVSKEVKEKWGKL 71 (170)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEE---------CCEEEEEECCCCHHCCCCHHHHHHHHHH
T ss_conf 9899989999999999999689962786078977852058853---------8779999657840101687799999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 98777766420000011223578875454554321025753221222211110246899999999997531368986899
Q gi|254780484|r 111 IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 (212)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 190 (212)
T Consensus 72 ~~~~l~~~~~~~~vi~viD~~~~~~~~d~~i~~~l~~~~kp~iiVlNKiDlv~~~~~~~~~~~~~~~l~~-~~~~~~ii~ 150 (170)
T cd01876 72 IEEYLENRENLKGVVLLIDSRHGPTEIDLEMLDWLEELGIPFLVVLTKADKLKKSELAKALKEIKKELKL-FEIDPPIIL 150 (170)
T ss_pred HHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHC-CCCCCEEEE
T ss_conf 9999984063349999996322374868999999987699879999867537877899999999998742-179983999
Q ss_pred EECCCCCCHHHHHHHHHHHH
Q ss_conf 98888899899999999872
Q gi|254780484|r 191 TSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 191 vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 151 iSA~~g~gi~~L~~~I~~~L 170 (170)
T cd01876 151 FSSLKGQGIDELRALIEKWL 170 (170)
T ss_pred EECCCCCCHHHHHHHHHHHC
T ss_conf 98899977999999999859