HHsearch alignment for GI: 254780484 and conserved domain: cd01879
>cd01879 FeoB Ferrous iron transport protein B (FeoB) subfamily. E. coli has an iron(II) transport system, known as feo, which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.96 E-value=9.5e-29 Score=184.42 Aligned_cols=157 Identities=24% Similarity=0.299 Sum_probs=109.2
Q ss_pred EECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97489988989999973897379873888414521202665556785089649999760010111224478988889987
Q gi|254780484|r 34 FSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVR 113 (212)
Q Consensus 34 ivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~ 113 (212)
T Consensus 1 ivG~pNvGKSTL~N~L~g~~--~~vs~~pgtTrd~------~~~~~~~~~~~~~lvDtpGi~~~~~~~~~e~i-~~---~ 68 (158)
T cd01879 1 LVGNPNVGKTTLFNALTGAR--QKVGNWPGVTVEK------KEGRFKLGGKEIEIVDLPGTYSLSPYSEDEKV-AR---D 68 (158)
T ss_pred CCCCCCCCHHHHHHHHHCCC--CEECCCCCCEEEE------EEEEEEECCEEEEEEECCCCCCCCCCCHHHHH-HH---H
T ss_conf 97989888999999995998--6461789827634------78899629937999979874125641356789-99---9
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
Q ss_conf 77766420000011223578875454554321025753221222211110246899999999997531368986899988
Q gi|254780484|r 114 YLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPTSS 193 (212)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vSA 193 (212)
T Consensus 69 ~~~-~~~~d~vl~vvD~~~--~~~~l~~~~~l~~~~~p~ivV~NK~D~~~~~~~~~~~~~l~~~~------~~~ii~iSA 139 (158)
T cd01879 69 FLL-GEKPDLIVNVVDATN--LERNLYLTLQLLELGLPVVVALNMIDEAEKRGIKIDLDKLSELL------GVPVVPTSA 139 (158)
T ss_pred HHH-HCCCCCEEEEEECCH--HHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHC------CCCEEEEEC
T ss_conf 998-517871799977740--67768999999865998899940277655225466799999871------994899987
Q ss_pred CCCCCHHHHHHHHHHHHC
Q ss_conf 888998999999998728
Q gi|254780484|r 194 VKRKGIEVLRKAILETIN 211 (212)
Q Consensus 194 ~~g~Gi~eL~~~I~~~l~ 211 (212)
T Consensus 140 ~~g~Gi~~L~~~i~el~~ 157 (158)
T cd01879 140 RKGEGIDELKDAIAELAE 157 (158)
T ss_pred CCCCCHHHHHHHHHHHHC
T ss_conf 789799999999999867