HHsearch alignment for GI: 254780484 and conserved domain: cd01890

>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=99.83  E-value=1.2e-19  Score=132.18  Aligned_cols=163  Identities=19%  Similarity=0.206  Sum_probs=105.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCE-------EEECCEEEEEEEEEEEE-----CCCEEEEEECCHHHHHH
Q ss_conf             8999748998898999997389737987388841-------45212026655567850-----89649999760010111
Q gi|254780484|r   31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR-------TQHLNFFVPKDFSNLKN-----NLPAMALVDMPGYGYAR   98 (212)
Q Consensus        31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~t-------t~~~~~~~~~~~~~~~~-----~~~~~~~~DtpG~~~~~   98 (212)
T Consensus         2 NiaiiGHvd~GKTTL~~~ll~~tg~i~~~~~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh~dF~   81 (179)
T cd01890           2 NFSIIAHIDHGKSTLADRLLELTGTVSKREMKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGHVDFS   81 (179)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCH
T ss_conf             59999489989899999999985995414573244165176786386687433688841367871489999899864517


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             22447898888998777766420000011223578875454554321025753221222211110246899999999997
Q gi|254780484|r   99 APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI  178 (212)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~  178 (212)
T Consensus        82 ~~-------------~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad-~~~v~~~i~~~~  147 (179)
T cd01890          82 YE-------------VSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSAD-PERVKQQIEDVL  147 (179)
T ss_pred             HH-------------HHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-HHHHHHHHHHHH
T ss_conf             78-------------9889975442789986477873748999999987699889998655567789-999999999986


Q ss_pred             HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             53136898689998888899899999999872
Q gi|254780484|r  179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETI  210 (212)
Q Consensus       179 ~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l  210 (212)
T Consensus       148 ---g~~~~~~v~vSA~~g~gv~~Ll~~i~~~i  176 (179)
T cd01890         148 ---GLDPSEAILVSAKTGLGVEDLLEAIVERI  176 (179)
T ss_pred             ---CCCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf             ---88976748843788979899999999648