HHsearch alignment for GI: 254780484 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=99.83 E-value=1.2e-19 Score=132.18 Aligned_cols=163 Identities=19% Similarity=0.206 Sum_probs=105.8
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCE-------EEECCEEEEEEEEEEEE-----CCCEEEEEECCHHHHHH
Q ss_conf 8999748998898999997389737987388841-------45212026655567850-----89649999760010111
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGR-------TQHLNFFVPKDFSNLKN-----NLPAMALVDMPGYGYAR 98 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~t-------t~~~~~~~~~~~~~~~~-----~~~~~~~~DtpG~~~~~ 98 (212)
T Consensus 2 NiaiiGHvd~GKTTL~~~ll~~tg~i~~~~~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh~dF~ 81 (179)
T cd01890 2 NFSIIAHIDHGKSTLADRLLELTGTVSKREMKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGHVDFS 81 (179)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCH
T ss_conf 59999489989899999999985995414573244165176786386687433688841367871489999899864517
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 22447898888998777766420000011223578875454554321025753221222211110246899999999997
Q gi|254780484|r 99 APKKNVDSWGGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLI 178 (212)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~ 178 (212)
T Consensus 82 ~~-------------~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad-~~~v~~~i~~~~ 147 (179)
T cd01890 82 YE-------------VSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSAD-PERVKQQIEDVL 147 (179)
T ss_pred HH-------------HHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-HHHHHHHHHHHH
T ss_conf 78-------------9889975442789986477873748999999987699889998655567789-999999999986
Q ss_pred HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 53136898689998888899899999999872
Q gi|254780484|r 179 RNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 179 ~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 148 ---g~~~~~~v~vSA~~g~gv~~Ll~~i~~~i 176 (179)
T cd01890 148 ---GLDPSEAILVSAKTGLGVEDLLEAIVERI 176 (179)
T ss_pred ---CCCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf ---88976748843788979899999999648