>cd01893 Miro1 Miro1 subfamily. Miro (mitochondrial Rho) proteins have tandem GTP-binding domains separated by a linker region containing putative calcium-binding EF hand motifs. Genes encoding Miro-like proteins were found in several eukaryotic organisms. This CD represents the N-terminal GTPase domain of Miro proteins. These atypical Rho GTPases have roles in mitochondrial homeostasis and apoptosis. Most Rho proteins contain a lipid modification site at the C-terminus; however, Miro is one of few Rho subfamilies that lack this feature.

Probab=99.62 E-value=1.2e-14 Score=103.44 Aligned_cols=159 Identities=16% Similarity=0.112 Sum_probs=90.2 Q ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHH Q ss_conf 68999748998898999997389737987388841452120266555678508964999976001011122447898888 Q gi|254780484|r 30 PEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGG 109 (212) Q Consensus 30 p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~ 109 (212) T Consensus 1 lKiv~vGd~~VGKTsli~r~~~~~F---~~~~~~t~~~-----~~~~~~~~~~~v~l~i~DtaG~e~~~~~~~~------ 66 (166) T cd01893 1 VRIVLIGDEGVGKSSLIMSLVSEEF---PENVPRVLPE-----ITIPADVTPERVPTTIVDTSSRPQDRANLAA------ 66 (166) T ss_pred CEEEEECCCCCCHHHHHHHHHHCCC---CCCCCCCCCC-----EEEEEEECCEEEEEEEEECCCCCCCCHHHHH------ T ss_conf 9899999999899999999984978---8877763456-----8999998890999999989987230245798------ Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCC--CHHH---HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC Q ss_conf 9987777664200000112235788--7545---4554321025753221222211110246899999999997531368 Q gi|254780484|r 110 LIVRYLSERSTLRCVYLLIDCRHGV--KQID---QDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTA 184 (212) Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~ 184 (212) T Consensus 67 ----~~---~~a~~~ilvydit~~~Sf~~i~~~w~~~i~-~~~~~~piilvGNK~DL~~~r~~~~~e~~~~~~~~~~~-~ 137 (166) T cd01893 67 ----EI---RKANVICLVYSVDRPSTLERIRTKWLPLIR-RLGVKVPIILVGNKSDLRDGSSQAGLEEEMLPIMNEFR-E 137 (166) T ss_pred ----HH---CCCCEEEEEECCCCHHHHHHHHHHHHHHHH-HHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-C T ss_conf ----73---689889999708987789999999999999-86899968999988654002503358899999999730-7 Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHC Q ss_conf 986899988888998999999998728 Q gi|254780484|r 185 HPEVIPTSSVKRKGIEVLRKAILETIN 211 (212) Q Consensus 185 ~~~i~~vSA~~g~Gi~eL~~~I~~~l~ 211 (212) T Consensus 138 ~~~~~EtSAktg~nV~e~F~~~~k~~l 164 (166) T cd01893 138 IETCVECSAKTLINVSEVFYYAQKAVL 164 (166) T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHH T ss_conf 488999065889198999999999980

HHsearch alignment for GI: 254780484 and conserved domain: cd01893