HHsearch alignment for GI: 254780484 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=100.00 E-value=1.6e-31 Score=200.32 Aligned_cols=171 Identities=23% Similarity=0.317 Sum_probs=125.1
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 68689997489988989999973897379873888414521202665556785089649999760010111224478988
Q gi|254780484|r 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSW 107 (212)
Q Consensus 28 ~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~ 107 (212)
T Consensus 1 ~~~~V~ivG~pN~GKSTL~N~l~g~~~-~~vs~~pgtTr~~------~~~~~~~~~~~~~~vDtpGi~~~~~~~~~~e~~ 73 (174)
T cd01895 1 DPIRIAIIGRPNVGKSSLVNALLGEER-VIVSDIAGTTRDS------IDVPFEYDGKKYTLIDTAGIRRKGKVEEGIEKY 73 (174)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC-EEECCCCCCEEEC------CEEEEEECCEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf 998999998999989999999838984-4434999915733------289999999889998578842134421068899
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH--HHHHHHHHHHHHHCCCCC
Q ss_conf 889987777664200000112235788754545543210257532212222111102468--999999999975313689
Q gi|254780484|r 108 GGLIVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTA--QETLEKTKYLIRNYPTAH 185 (212)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~--~~~~~~~~~~~~~~~~~~ 185 (212)
T Consensus 74 --~~~~~~~~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~--~~~~ 149 (174)
T cd01895 74 --SVLRTLKAIERADVVLLVIDATEGITEQDLRIAGLILEEGKALVIVVNKWDLVEKDSKTMKEFKKEIRRKLP--FLDY 149 (174)
T ss_pred --HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECEECCCCCHHHHHHHHHHHHHHHC--CCCC
T ss_conf --999999999842865899758989988999999999985998699985675267647789999999998734--1689
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 868999888889989999999987
Q gi|254780484|r 186 PEVIPTSSVKRKGIEVLRKAILET 209 (212)
Q Consensus 186 ~~i~~vSA~~g~Gi~eL~~~I~~~ 209 (212)
T Consensus 150 ~~ii~iSA~~g~Gi~~L~~~I~ei 173 (174)
T cd01895 150 APIVFISALTGQGVDKLFDAIDEV 173 (174)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 928999744798999999999986