HHsearch alignment for GI: 254780484 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=97.28 E-value=0.00021 Score=44.48 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=21.1
Q ss_pred EEEEECCCCCCHHHHHHHHHCCC
Q ss_conf 89997489988989999973897
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRK 53 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~ 53 (212)
T Consensus 29 ~~~IvG~sGsGKSTLl~~l~g~~ 51 (218)
T cd03290 29 LTMIVGQVGCGKSSLLLAILGEM 51 (218)
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999980999999985556