HHsearch alignment for GI: 254780484 and conserved domain: cd03296
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.63 E-value=0.0014 Score=39.65 Aligned_cols=23 Identities=26% Similarity=0.507 Sum_probs=21.2
Q ss_pred EEEEECCCCCCHHHHHHHHHCCC
Q ss_conf 89997489988989999973897
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRK 53 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~ 53 (212)
T Consensus 30 ~~~iiGpSGsGKSTll~~i~Gl~ 52 (239)
T cd03296 30 LVALLGPSGSGKTTLLRLIAGLE 52 (239)
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999977999999997699