HHsearch alignment for GI: 254780484 and conserved domain: cd04129

>cd04129 Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that plays a role in cell morphogenesis, control of cell wall integrity, control of growth polarity, and maintenance of growth direction. Rho2 activates the protein kinase C homolog Pck2, and Pck2 controls Mok1, the major (1-3) alpha-D-glucan synthase. Together with Rho1 (RhoA), Rho2 regulates the construction of the cell wall. Unlike Rho1, Rho2 is not an essential protein, but its overexpression is lethal. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for proper intracellular localization via membrane attachment. As with other Rho family GTPases, the GDP/GTP cycling is regulated by GEFs (guanine nucleotide exchange factors), GAPs (GTPase-activating proteins) and GDIs (guanine nucleotide dissociation inhibitors).
Probab=99.40  E-value=1.4e-12  Score=91.45  Aligned_cols=160  Identities=13%  Similarity=0.107  Sum_probs=83.6

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             86899974899889899999738973798738884145212026655567850896499997600101112244789888
Q gi|254780484|r   29 PPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWG  108 (212)
Q Consensus        29 ~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~  108 (212)
T Consensus         1 r~KivllGd~~VGKTsLi~r~~~~~f-~~-~y~pTi-~~-~--~-~~~i~v~~~~v~l~iwDTaG~e~~~~~~~~~----   69 (187)
T cd04129           1 RRKLVIVGDGACGKTSLLSVFTLGEF-PE-EYHPTV-FE-N--Y-VTDCRVDGKPVQLALWDTAGQEEYERLRPLS----   69 (187)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHCCC-CC-CCCCCE-EE-E--E-EEEEEECCEEEEEEEEECCCCCCCCCCCCCE----
T ss_conf             91999999899768999999982989-99-878866-78-9--8-9999999999999999788870345460412----


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCC--CHHHHHHHHHH--CCCCCCCCCCCCCCCCCCHHH--------HHHHHHHHHH
Q ss_conf             89987777664200000112235788--75454554321--025753221222211110246--------8999999999
Q gi|254780484|r  109 GLIVRYLSERSTLRCVYLLIDCRHGV--KQIDQDVFSFL--DKKAVSYQIVLTKIDKLSPTT--------AQETLEKTKY  176 (212)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~v~nK~D~~~~~~--------~~~~~~~~~~  176 (212)
T Consensus        70 ------~---~~a~~~ilvydi~~~~Sf~~~~~~w~~~~~~~~~~~piilVGnK~DL~~~~~~~~~~~~~r~V~~~~g~~  140 (187)
T cd04129          70 ------Y---SKAHVILIGFAVDTPDSLENVRTKWIEEVRRYCPNVPVILVGLKKDLRQDAVAKEEYRTQRFVPIQQGKR  140 (187)
T ss_pred             ------E---CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCHHHHHH
T ss_conf             ------3---3885899970269866799999999999998587998899988600113411211122315578999999


Q ss_pred             HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             9753136898689998888899899999999872
Q gi|254780484|r  177 LIRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI  210 (212)
Q Consensus       177 ~~~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l  210 (212)
T Consensus       141 ~a~~--~~~~~y~EtSAk~~~nV~e~F~~~~r~~  172 (187)
T cd04129         141 VAKE--IGAKKYMECSALTGEGVDDVFEAATRAA  172 (187)
T ss_pred             HHHH--CCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf             9998--4997899968899979899999999999