HHsearch alignment for GI: 254780484 and conserved domain: cd04159
>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.
Probab=99.73 E-value=4.4e-17 Score=117.36 Aligned_cols=154 Identities=16% Similarity=0.245 Sum_probs=92.2
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 89997489988989999973897379873888414521202665556785089649999760010111224478988889
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL 110 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~ 110 (212)
T Consensus 1 ~I~llG~~~~GKTsll~~~~~~~f~~~~--~pTig--~~~------~~i~~~~~~l~iwDt~G~e~~~~l---------- 60 (159)
T cd04159 1 EITLVGLQNSGKTTLVNVIAGGQFSEDT--IPTVG--FNM------RKVTKGNVTLKVWDLGGQPRFRSM---------- 60 (159)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCCCCC--CCCCC--EEE------EEEEECCEEEEEEECCCHHHHHHH----------
T ss_conf 9899999998699999999759998861--67325--058------999989999999979835877999----------
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHH-----HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 987777664200000112235788754-----545543210257532212222111102468999999999975313689
Q gi|254780484|r 111 IVRYLSERSTLRCVYLLIDCRHGVKQI-----DQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAH 185 (212)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (212)
T Consensus 61 ~~~y---~~~~~~ii~V~D~sd~~s~~~~~~~l~~~~~~~~~~~~piliv~NK~Dl~~~~~~~~i~~~~~~--~~~~~~~ 135 (159)
T cd04159 61 WERY---CRGVNAIVYVVDAADRTALEAAKNELHDLLEKPSLEGIPLLVLGNKNDLPGALSVDELIEQMNL--KSITDRE 135 (159)
T ss_pred HHHH---HCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH--HHHHCCC
T ss_conf 9987---4686368751577878899999999999985443489828988835676434789999999999--9873499
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 868999888889989999999987
Q gi|254780484|r 186 PEVIPTSSVKRKGIEVLRKAILET 209 (212)
Q Consensus 186 ~~i~~vSA~~g~Gi~eL~~~I~~~ 209 (212)
T Consensus 136 ~~~~~~SAktg~gI~e~f~wL~~~ 159 (159)
T cd04159 136 VSCYSISCKEKTNIDIVLDWLIKH 159 (159)
T ss_pred CEEEEEECCCCCCHHHHHHHHHCC
T ss_conf 879999796896989999999659