HHsearch alignment for GI: 254780484 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.73 E-value=2.8e-17 Score=118.48 Aligned_cols=157 Identities=15% Similarity=0.142 Sum_probs=93.2
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 68689997489988989999973897379873888414521202665556785089649999760010111224478988
Q gi|254780484|r 28 GPPEIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSW 107 (212)
Q Consensus 28 ~~p~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~ 107 (212)
T Consensus 13 k~~Ki~llG~~~vGKTsll~~~~~~~~-~~--~~pTig--~~------~~~v~~~~~~~~iwDt~Gqe~~~~~~------ 75 (174)
T pfam00025 13 KEMRILILGLDNAGKTTILYKLKLGEI-VT--TIPTIG--FN------VETVTYKNVKFTVWDVGGQESLRPLW------ 75 (174)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHCCCC-CC--CCCCCC--CE------EEEEEECCEEEEEEECCCCCCCCHHH------
T ss_conf 666999999999988999999954998-87--447468--23------89999899999998279870232679------
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCC--HHHHHH---HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 8899877776642000001122357887--545455---43210257532212222111102468999999999975313
Q gi|254780484|r 108 GGLIVRYLSERSTLRCVYLLIDCRHGVK--QIDQDV---FSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYP 182 (212)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~ 182 (212)
T Consensus 76 ----~~y---~~~a~~ii~V~D~t~~~s~~~~~~~l~~~l~~~~~~~~piliv~NK~DL~~~~~~~ei~~~~~~--~~~~ 146 (174)
T pfam00025 76 ----RNY---FPNTDAVIFVVDSADRDRIEEAKEELHALLNEEELADAPLLILANKQDLPGAMSEAEIRELLGL--HELK 146 (174)
T ss_pred ----HHH---HCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH--HHCC
T ss_conf ----988---4178268999867867879999999999875423589708998725667678999999999978--6441
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 6898689998888899899999999872
Q gi|254780484|r 183 TAHPEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 183 ~~~~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 147 ~~~~~~~~~SAktG~gI~e~f~~L~~~I 174 (174)
T pfam00025 147 SRPWEIQGCSAVTGEGLDEGLDWLSNYI 174 (174)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 7996899998867959899999999539