HHsearch alignment for GI: 254780484 and conserved domain: pfam02421
>pfam02421 FeoB_N Ferrous iron transport protein B. Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=99.97 E-value=8.5e-30 Score=190.44 Aligned_cols=160 Identities=24% Similarity=0.305 Sum_probs=110.5
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHH
Q ss_conf 89997489988989999973897379873888414521202665556785089649999760010111224478988889
Q gi|254780484|r 31 EIAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGL 110 (212)
Q Consensus 31 ~VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~ 110 (212)
T Consensus 1 tVaIvG~PNvGKSTLlN~L~g~~--~~Vs~~pGtTrd~------~~~~~~~~~~~~~lvDTpGi~~~~~~~~-~e~v~~- 70 (188)
T pfam02421 1 TIALVGNPNVGKTTLFNALTGAR--QHVGNWPGVTVEK------KEGTFKYKGYEIEIVDLPGTYSLSPYSE-EEKVAR- 70 (188)
T ss_pred CEEEECCCCCCHHHHHHHHHCCC--CEEECCCCCCCCE------EEEEEEECCEEEEEEECCCCCCCCCCCH-HHHHHH-
T ss_conf 98998899989999999995999--6563899972333------5768752516799996888501465327-899999-
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 98777766420000011223578875454554321025753221222211110246899999999997531368986899
Q gi|254780484|r 111 IVRYLSERSTLRCVYLLIDCRHGVKQIDQDVFSFLDKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIP 190 (212)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 190 (212)
T Consensus 71 -~-~~-~~~~aDlvl~vvDa~~~--er~l~l~~~l~~~~~p~IvVlNK~Dl~~~~~~~~~~~~l~~~l------g~~vi~ 139 (188)
T pfam02421 71 -D-YL-LEEKPDVIINVVDATNL--ERNLYLTLQLLELGIPVVVALNMMDEAEKKGIKIDIKKLSELL------GVPVVP 139 (188)
T ss_pred -H-HH-HHCCCCCEEEEEECCCH--HHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCHHHHHHHHHHC------CCCEEE
T ss_conf -9-98-62368736999767624--5448999999976998899961702010036520399999873------996899
Q ss_pred EECCCCCCHHHHHHHHHHHHC
Q ss_conf 988888998999999998728
Q gi|254780484|r 191 TSSVKRKGIEVLRKAILETIN 211 (212)
Q Consensus 191 vSA~~g~Gi~eL~~~I~~~l~ 211 (212)
T Consensus 140 ISA~~g~Gi~eL~~~I~~~~~ 160 (188)
T pfam02421 140 TSARKGEGIDELKDAIIEVAE 160 (188)
T ss_pred EEEECCCCHHHHHHHHHHHHH
T ss_conf 993169999999999999972