HHsearch alignment for GI: 254780484 and conserved domain: smart00174
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=99.51 E-value=3.2e-13 Score=95.13 Aligned_cols=157 Identities=11% Similarity=0.104 Sum_probs=83.5
Q ss_pred EEEECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99974899889899999738973798738884145212026655567850896499997600101112244789888899
Q gi|254780484|r 32 IAFSGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLI 111 (212)
Q Consensus 32 VaivG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~ 111 (212)
T Consensus 1 ivllGd~~VGKTsli~r~~~~~f~--~~y~~Ti--~~---~~~~~~~~~~~~~~l~i~DtaG~e~~~~l~~~-------- 65 (174)
T smart00174 1 LVVVGDGAVGKTCLLISYTTNAFP--EDYVPTV--FE---NYSADVEVDGKPVELGLWDTAGQEDYDRLRPL-------- 65 (174)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCC--CCCCCCE--EE---EEEEEEEECCEEEEEEEEECCCCCCCCCCCHH--------
T ss_conf 599897897599999999539899--9857850--57---89999999999999999948987034545001--------
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCC--CHHHHHHHHHH--CCCCCCCCCCCCCCCCCCHHHHHHH----------HHHHHHH
Q ss_conf 87777664200000112235788--75454554321--0257532212222111102468999----------9999999
Q gi|254780484|r 112 VRYLSERSTLRCVYLLIDCRHGV--KQIDQDVFSFL--DKKAVSYQIVLTKIDKLSPTTAQET----------LEKTKYL 177 (212)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~v~nK~D~~~~~~~~~~----------~~~~~~~ 177 (212)
T Consensus 66 --~~---~~a~~~ilvydvt~~~Sf~~~~~~w~~~i~~~~~~~piilVgnK~DL~~~~~~~~~~~~~~~~~Vs~~~~~~~ 140 (174)
T smart00174 66 --SY---PDTDVFLICFSVDSPASFENVKEKWYPEVKHFCPNTPIILVGTKLDLREDKSTLRELSKQKQEPVTYEQGEAL 140 (174)
T ss_pred --HC---CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf --10---4886899997589878999999989999998688986999987542501233354553314650029999999
Q ss_pred HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 753136898689998888899899999999872
Q gi|254780484|r 178 IRNYPTAHPEVIPTSSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 178 ~~~~~~~~~~i~~vSA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 141 a~~--~~~~~y~EtSAk~g~nV~e~F~~l~r~~ 171 (174)
T smart00174 141 AKR--IGAVKYLECSALTQEGVREVFEEAIRAA 171 (174)
T ss_pred HHH--CCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 998--3997899964588949899999999997