HHsearch alignment for GI: 254780484 and conserved domain: smart00176
>smart00176 RAN Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases. Ran is involved in the active transport of proteins through nuclear pores.
Probab=99.42 E-value=5.7e-13 Score=93.72 Aligned_cols=150 Identities=9% Similarity=0.044 Sum_probs=82.0
Q ss_pred ECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 74899889899999738973798738884145212026655567850896499997600101112244789888899877
Q gi|254780484|r 35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRY 114 (212)
Q Consensus 35 vG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~ 114 (212)
T Consensus 1 vGD~gVGKTsli~R~~~~~F~--~~y~pTiGvd----~~~~~~~~~~~~i~l~iWDTAGqE~f~sl~~~yy--------- 65 (200)
T smart00176 1 VGDGGTGKTTFVKRHLTGEFE--KKYVATLGVE----VHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYY--------- 65 (200)
T ss_pred CCCCCCCHHHHHHHHHCCCCC--CCCCCCEEEE----EEEEEEEECCEEEEEEEEECCCCCCCCCCCHHHC---------
T ss_conf 989887899999999409999--9978871489----8999999899899999998988700011026550---------
Q ss_pred HHHHHHHCCCCCCCCCCCC--CCHHHHHHHHHH-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 7766420000011223578--875454554321-0257532212222111102468999999999975313689868999
Q gi|254780484|r 115 LSERSTLRCVYLLIDCRHG--VKQIDQDVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT 191 (212)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v 191 (212)
T Consensus 66 ----r~a~~~IlvfDvt~~~SF~~l~~W~~~l~~~~~~ipiiLvGNK~DL~~r-~V~~e--~~-~~a~---~~~~~y~Et 134 (200)
T smart00176 66 ----IQGQCAIIMFDVTARVTYKNVPNWHRDLVRVCENIPIVLCGNKVDVKDR-KVKAK--SI-TFHR---KKNLQYYDI 134 (200)
T ss_pred ----CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CCCHH--HH-HHHH---HCCCCEEEE
T ss_conf ----5787889996358778999899999999985799988999988757404-36599--99-9999---879978983
Q ss_pred ECCCCCCHHHHHHHHHHHH
Q ss_conf 8888899899999999872
Q gi|254780484|r 192 SSVKRKGIEVLRKAILETI 210 (212)
Q Consensus 192 SA~~g~Gi~eL~~~I~~~l 210 (212)
T Consensus 135 SAKt~~Nv~e~F~~Lar~L 153 (200)
T smart00176 135 SAKSNYNFEKPFLWLARKL 153 (200)
T ss_pred ECCCCCCHHHHHHHHHHHH
T ss_conf 0046969799999999998