HHsearch alignment for GI: 254780484 and conserved domain: smart00176

>smart00176 RAN Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases. Ran is involved in the active transport of proteins through nuclear pores.
Probab=99.42  E-value=5.7e-13  Score=93.72  Aligned_cols=150  Identities=9%  Similarity=0.044  Sum_probs=82.0

Q ss_pred             ECCCCCCHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             74899889899999738973798738884145212026655567850896499997600101112244789888899877
Q gi|254780484|r   35 SGRSNVGKSSLINILVNRKNLARTSNAPGRTQHLNFFVPKDFSNLKNNLPAMALVDMPGYGYARAPKKNVDSWGGLIVRY  114 (212)
Q Consensus        35 vG~~NvGKSSLiNaL~g~~~~a~~~~~p~tt~~~~~~~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~  114 (212)
T Consensus         1 vGD~gVGKTsli~R~~~~~F~--~~y~pTiGvd----~~~~~~~~~~~~i~l~iWDTAGqE~f~sl~~~yy---------   65 (200)
T smart00176        1 VGDGGTGKTTFVKRHLTGEFE--KKYVATLGVE----VHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYY---------   65 (200)
T ss_pred             CCCCCCCHHHHHHHHHCCCCC--CCCCCCEEEE----EEEEEEEECCEEEEEEEEECCCCCCCCCCCHHHC---------
T ss_conf             989887899999999409999--9978871489----8999999899899999998988700011026550---------


Q ss_pred             HHHHHHHCCCCCCCCCCCC--CCHHHHHHHHHH-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             7766420000011223578--875454554321-0257532212222111102468999999999975313689868999
Q gi|254780484|r  115 LSERSTLRCVYLLIDCRHG--VKQIDQDVFSFL-DKKAVSYQIVLTKIDKLSPTTAQETLEKTKYLIRNYPTAHPEVIPT  191 (212)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~v~nK~D~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v  191 (212)
T Consensus        66 ----r~a~~~IlvfDvt~~~SF~~l~~W~~~l~~~~~~ipiiLvGNK~DL~~r-~V~~e--~~-~~a~---~~~~~y~Et  134 (200)
T smart00176       66 ----IQGQCAIIMFDVTARVTYKNVPNWHRDLVRVCENIPIVLCGNKVDVKDR-KVKAK--SI-TFHR---KKNLQYYDI  134 (200)
T ss_pred             ----CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CCCHH--HH-HHHH---HCCCCEEEE
T ss_conf             ----5787889996358778999899999999985799988999988757404-36599--99-9999---879978983


Q ss_pred             ECCCCCCHHHHHHHHHHHH
Q ss_conf             8888899899999999872
Q gi|254780484|r  192 SSVKRKGIEVLRKAILETI  210 (212)
Q Consensus       192 SA~~g~Gi~eL~~~I~~~l  210 (212)
T Consensus       135 SAKt~~Nv~e~F~~Lar~L  153 (200)
T smart00176      135 SAKSNYNFEKPFLWLARKL  153 (200)
T ss_pred             ECCCCCCHHHHHHHHHHHH
T ss_conf             0046969799999999998