HHsearch alignment for GI: 254780485 and conserved domain: COG0320
>COG0320 LipA Lipoate synthase [Coenzyme metabolism].
Probab=99.83 E-value=8.6e-19 Score=145.61 Aligned_cols=188 Identities=23% Similarity=0.402 Sum_probs=150.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC-CCCCHHHHHHHHHHHCCCCCCEE
Q ss_conf 78683423212433547775641000685799999999996498389973036888-74428999998876213688324
Q gi|254780485|r 62 TGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREP-KERDLSIIVDMIKGVKSLGLETC 140 (328)
Q Consensus 62 TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~-~~~~~~~~~e~i~~i~~~~~~i~ 140 (328)
T Consensus 77 G~~CTR~C~FC~V~~g~----P--~~lD~~EP~rvAeaV~~mgLkyVViTsVdRDDL~DGGA~hfa~~i~~Ir~~~P~t~ 150 (306)
T COG0320 77 GDICTRRCRFCDVKTGR----P--NPLDPDEPERVAEAVKDMGLKYVVITSVDRDDLPDGGAQHFAECIRAIRELNPQTT 150 (306)
T ss_pred CCHHCCCCCCCCCCCCC----C--CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 51322678853147899----9--99997427899999998389869997531566656456899999999996399964
Q ss_pred EEC----CCCCHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCC--CCCCCEEEECCCCCHHHH
Q ss_conf 102----56999999987415760697513437777320588889899999999999879--855770786689899999
Q gi|254780485|r 141 MTL----GMLSFEQAQILSKAGLDYYNHNIDTSERFYPHVTTTHTFEDRLQTLENVRKSG--IKVCCGGILGLGEMIDDR 214 (328)
Q Consensus 141 ~~~----g~~~~~~~~~Lk~aG~~~~~~~let~~~~~~~~~~~~~~~~~l~~~~~a~~~G--~~~~sg~l~G~gEt~eer 214 (328)
T Consensus 151 iEvL~PDF~G~~~al~~v~~~~pdV~nHNvETVprL~~~VRp~A~Y~~SL~~L~~~k~~~P~i~TKSgiMlGLGEt~~Ev 230 (306)
T COG0320 151 IEVLTPDFRGNDDALEIVADAGPDVFNHNVETVPRLYPRVRPGATYERSLSLLERAKELGPDIPTKSGLMVGLGETDEEV 230 (306)
T ss_pred EEEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHH
T ss_conf 89838654678999999983696110045200001142568987688899999999985898631121355057768999
Q ss_pred HHHHHHHHHCCCCCCEEECC-CEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 99999997408888602054-112048741244568798999999
Q gi|254780485|r 215 IDMLLTLANLSTPPESIPIN-LLIPIPGSKFEENKKVDPIEHVRI 258 (328)
Q Consensus 215 i~~l~~lr~l~~~~~~v~~~-~~~p~~gt~l~~~~~~~~~e~lr~ 258 (328)
T Consensus 231 ~e~m~DLr~~gv--dilTiGQYlqPS~~-HlpV~ryv~PeeF~~~ 272 (306)
T COG0320 231 IEVMDDLRSAGV--DILTIGQYLQPSRK-HLPVQRYVTPEEFDEL 272 (306)
T ss_pred HHHHHHHHHCCC--CEEEECCCCCCCCC-CCCCEECCCHHHHHHH
T ss_conf 999999998599--89973001477624-5883321188999999