HHsearch alignment for GI: 254780485 and conserved domain: COG0320

>COG0320 LipA Lipoate synthase [Coenzyme metabolism].
Probab=99.83  E-value=8.6e-19  Score=145.61  Aligned_cols=188  Identities=23%  Similarity=0.402  Sum_probs=150.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC-CCCCHHHHHHHHHHHCCCCCCEE
Q ss_conf             78683423212433547775641000685799999999996498389973036888-74428999998876213688324
Q gi|254780485|r   62 TGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREP-KERDLSIIVDMIKGVKSLGLETC  140 (328)
Q Consensus        62 TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~-~~~~~~~~~e~i~~i~~~~~~i~  140 (328)
T Consensus        77 G~~CTR~C~FC~V~~g~----P--~~lD~~EP~rvAeaV~~mgLkyVViTsVdRDDL~DGGA~hfa~~i~~Ir~~~P~t~  150 (306)
T COG0320          77 GDICTRRCRFCDVKTGR----P--NPLDPDEPERVAEAVKDMGLKYVVITSVDRDDLPDGGAQHFAECIRAIRELNPQTT  150 (306)
T ss_pred             CCHHCCCCCCCCCCCCC----C--CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf             51322678853147899----9--99997427899999998389869997531566656456899999999996399964


Q ss_pred             EEC----CCCCHHHHHHHHCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCC--CCCCCEEEECCCCCHHHH
Q ss_conf             102----56999999987415760697513437777320588889899999999999879--855770786689899999
Q gi|254780485|r  141 MTL----GMLSFEQAQILSKAGLDYYNHNIDTSERFYPHVTTTHTFEDRLQTLENVRKSG--IKVCCGGILGLGEMIDDR  214 (328)
Q Consensus       141 ~~~----g~~~~~~~~~Lk~aG~~~~~~~let~~~~~~~~~~~~~~~~~l~~~~~a~~~G--~~~~sg~l~G~gEt~eer  214 (328)
T Consensus       151 iEvL~PDF~G~~~al~~v~~~~pdV~nHNvETVprL~~~VRp~A~Y~~SL~~L~~~k~~~P~i~TKSgiMlGLGEt~~Ev  230 (306)
T COG0320         151 IEVLTPDFRGNDDALEIVADAGPDVFNHNVETVPRLYPRVRPGATYERSLSLLERAKELGPDIPTKSGLMVGLGETDEEV  230 (306)
T ss_pred             EEEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHH
T ss_conf             89838654678999999983696110045200001142568987688899999999985898631121355057768999


Q ss_pred             HHHHHHHHHCCCCCCEEECC-CEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             99999997408888602054-112048741244568798999999
Q gi|254780485|r  215 IDMLLTLANLSTPPESIPIN-LLIPIPGSKFEENKKVDPIEHVRI  258 (328)
Q Consensus       215 i~~l~~lr~l~~~~~~v~~~-~~~p~~gt~l~~~~~~~~~e~lr~  258 (328)
T Consensus       231 ~e~m~DLr~~gv--dilTiGQYlqPS~~-HlpV~ryv~PeeF~~~  272 (306)
T COG0320         231 IEVMDDLRSAGV--DILTIGQYLQPSRK-HLPVQRYVTPEEFDEL  272 (306)
T ss_pred             HHHHHHHHHCCC--CEEEECCCCCCCCC-CCCCEECCCHHHHHHH
T ss_conf             999999998599--89973001477624-5883321188999999