HHsearch alignment for GI: 254780485 and conserved domain: COG1242
>COG1242 Predicted Fe-S oxidoreductase [General function prediction only].
Probab=99.53 E-value=7.6e-12 Score=99.04 Aligned_cols=232 Identities=19% Similarity=0.299 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHCCCCEEE-EEEEEEECCCCCCC--------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-C
Q ss_conf 9999999988862898569-99864530786834--------232124335477756410006857999999999964-9
Q gi|254780485|r 35 LLFWSHTVHRKNFEPNHIQ-LSKLLNIKTGGCPE--------NCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKEN-G 104 (328)
Q Consensus 35 l~~~Aa~~~r~~~~g~~V~-~~~~in~~TN~C~~--------~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~-G 104 (328)
T Consensus 7 ~y~t~~~~lr~~f-g~Kv~Kv~ld~GF---~CPNRDGti~rGGCtFC~~~g~~d~~~~~-~~~i~~Q~~~q~~~~~kK~~ 81 (312)
T COG1242 7 LYYTLNDYLREKF-GEKVFKVTLDGGF---SCPNRDGTIGRGGCTFCSVAGSGDFAGQP-KISIAEQFKEQAERMHKKWK 81 (312)
T ss_pred HHHHHHHHHHHHH-CCEEEEEECCCCC---CCCCCCCCCCCCCEEEECCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHC
T ss_conf 7999999999983-8716998535777---89999996267864650677887634586-67789999999999987515
Q ss_pred -CE-EEEEECCCCCCCCCCHHHHHHHHHHHCCC----CCCEEEECCCCCHHHHHHHHCCCCC---EEEEECCC-CHHHHH
Q ss_conf -83-89973036888744289999988762136----8832410256999999987415760---69751343-777732
Q gi|254780485|r 105 -AT-RYCMGAAWREPKERDLSIIVDMIKGVKSL----GLETCMTLGMLSFEQAQILSKAGLD---YYNHNIDT-SERFYP 174 (328)
Q Consensus 105 -~~-~~~l~~~~~~~~~~~~~~~~e~i~~i~~~----~~~i~~~~g~~~~~~~~~Lk~aG~~---~~~~~let-~~~~~~ 174 (328)
T Consensus 82 ~~kyiaYFQ~~TNT--yApvevLre~ye~aL~~~~VVGLsIgTRPDClpd~VldlL~e~~~r~~vWvELGLQT~h~~Tlk 159 (312)
T COG1242 82 RGKYIAYFQAYTNT--YAPVEVLREMYEQALSEAGVVGLSIGTRPDCLPDDVLDLLAEYNKRYEVWVELGLQTAHDKTLK 159 (312)
T ss_pred CCCEEEEEECCCCC--CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHH
T ss_conf 78679998146666--6759999999999727588047750589988818999999998644578877453055589999
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECC-CCCHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCC------C
Q ss_conf 058888989999999999987985577078668-989999999999997408888602054112048741244------5
Q gi|254780485|r 175 HVTTTHTFEDRLQTLENVRKSGIKVCCGGILGL-GEMIDDRIDMLLTLANLSTPPESIPINLLIPIPGSKFEE------N 247 (328)
Q Consensus 175 ~~~~~~~~~~~l~~~~~a~~~G~~~~sg~l~G~-gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~~gt~l~~------~ 247 (328)
T Consensus 160 ~iNRgHd~~~y~dav~r~rkrgIkvc~HiI~GLPgE~~~~mleTak~v~~~~v--~GIKlH~LhvvkgT~m~k~Y~~G~l 237 (312)
T COG1242 160 RINRGHDFACYVDAVKRLRKRGIKVCTHLINGLPGETRDEMLETAKIVAELGV--DGIKLHPLHVVKGTPMEKMYEKGRL 237 (312)
T ss_pred HHHCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC--CEEEEEEEEEECCCHHHHHHHCCCC
T ss_conf 87624544999999999997497498888407988888999999999986687--5388887888638759999971886
Q ss_pred CCCCHHHHHHHHH-HHHHHCCCCCCE-EEE
Q ss_conf 6879899999999-999968687214-231
Q gi|254780485|r 248 KKVDPIEHVRIIS-VARILMPKSRLR-LAA 275 (328)
Q Consensus 248 ~~~~~~e~lr~iA-i~RL~lP~~~i~-i~~ 275 (328)
T Consensus 238 ~~ls~eeYv~~~~d~le~lpp~vviHRitg 267 (312)
T COG1242 238 KFLSLEEYVELVCDQLEHLPPEVVIHRITG 267 (312)
T ss_pred EECCHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 554599999999999974893269997037