HHsearch alignment for GI: 254780485 and conserved domain: COG1533

>COG1533 SplB DNA repair photolyase [DNA replication, recombination, and repair].
Probab=98.03  E-value=0.0008  Score=45.28  Aligned_cols=165  Identities=16%  Similarity=0.203  Sum_probs=92.8

Q ss_pred             EEEECCCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHH-C--CCEEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf             6453078683423212433547-775641000685799999999996-4--98389973036888744289999988762
Q gi|254780485|r   57 LLNIKTGGCPENCGYCNQSVHN-KSKLKASKLINVDQVLKEAKNAKE-N--GATRYCMGAAWREPKERDLSIIVDMIKGV  132 (328)
Q Consensus        57 ~in~~TN~C~~~C~fCaf~~~~-~~~~~~~~~~~~Eei~~~a~~~~~-~--G~~~~~l~~~~~~~~~~~~~~~~e~i~~i  132 (328)
T Consensus        32 ~inp-y~GC~h~C~YCYa~~~~~~~~~~~~~v~vk~n~~e~l~~el~~~~~k~~~i~is~~TD--pyqp~E~~~~ltR~i  108 (297)
T COG1533          32 TLNP-YRGCSHGCIYCYARPMHGYLPKSPTKVNVKENLLELLERELRKPGPKRTVIAISSVTD--PYQPIEKEYRLTRKI  108 (297)
T ss_pred             ECCC-CCCCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCC--CCCCHHHHHHHHHHH
T ss_conf             3377-4787788841336201466567860554015699999988752467855999854688--885647787899999


Q ss_pred             ----CCCCCCEEEEC-CCC---CHHHHHHHHCCCCCEEEEECCCC-HHHHHCCCCC-CCHHHHHHHHHHHHHCCCCCCCE
Q ss_conf             ----13688324102-569---99999987415760697513437-7773205888-89899999999999879855770
Q gi|254780485|r  133 ----KSLGLETCMTL-GML---SFEQAQILSKAGLDYYNHNIDTS-ERFYPHVTTT-HTFEDRLQTLENVRKSGIKVCCG  202 (328)
Q Consensus       133 ----~~~~~~i~~~~-g~~---~~~~~~~Lk~aG~~~~~~~let~-~~~~~~~~~~-~~~~~~l~~~~~a~~~G~~~~sg  202 (328)
T Consensus       109 lei~~~~~~~v~I~TKS~lv~RDld~l~~~~~~~~v~V~~Sitt~d~~l~k~~EP~apsp~~Ri~al~~l~eaGi~~~v-  187 (297)
T COG1533         109 LEILLKYGFPVSIVTKSALVLRDLDLLLELAERGKVRVAVSITTLDEELAKILEPRAPSPEERLEALKELSEAGIPVGL-  187 (297)
T ss_pred             HHHHHHCCCCEEEEECCCCHHCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEE-
T ss_conf             9998853996799977741010278998401126518999951684888986589996989999999999987984899-


Q ss_pred             EEECC---CCCHHHHHHHHHHHHHCCC
Q ss_conf             78668---9899999999999974088
Q gi|254780485|r  203 GILGL---GEMIDDRIDMLLTLANLST  226 (328)
Q Consensus       203 ~l~G~---gEt~eeri~~l~~lr~l~~  226 (328)
T Consensus       188 -~v~PIiP~~~d~e~e~~l~~~~~ag~  213 (297)
T COG1533         188 -FVAPIIPGLNDEELERILEAAAEAGA  213 (297)
T ss_pred             -EEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             -98553078875889999999997577