HHsearch alignment for GI: 254780485 and conserved domain: PRK04281
>PRK04281 consensus.
Probab=94.00 E-value=0.52 Score=26.44 Aligned_cols=201 Identities=12% Similarity=0.111 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC-CCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECCC--
Q ss_conf 999999999964983899730368887442899999887621-36883241025699999998741576069751343--
Q gi|254780485|r 92 QVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVK-SLGLETCMTLGMLSFEQAQILSKAGLDYYNHNIDT-- 168 (328)
Q Consensus 92 ei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~-~~~~~i~~~~g~~~~~~~~~Lk~aG~~~~~~~let-- 168 (328)
T Consensus 31 dP~~~ak~~~~~GadelhivDld~a~~~--~~~~~~~I~~i~~~~~vpi~vGGGIrs~e~~~~ll~~GadkViigs~a~~ 108 (254)
T PRK04281 31 DPVEAAKRYNGEGADELTFLDITASSDN--RDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVSINTAAVT 108 (254)
T ss_pred CHHHHHHHHHHCCCCEEEEEECCCCCCC--CHHHHHHHHHHHHHCCCCEEEECCEEECHHHHHHHHCCCCEEEECHHHHH
T ss_conf 9999999999869999999968898777--53089999999850796289977754518899999769988997776764
Q ss_pred CHHHHHCCCCCCCHHHHHHHHHHHHHCCCC-C-------------CCEEEECCC---CCHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 777732058888989999999999987985-5-------------770786689---89999999999997408888602
Q gi|254780485|r 169 SERFYPHVTTTHTFEDRLQTLENVRKSGIK-V-------------CCGGILGLG---EMIDDRIDMLLTLANLSTPPESI 231 (328)
Q Consensus 169 ~~~~~~~~~~~~~~~~~l~~~~~a~~~G~~-~-------------~sg~l~G~g---Et~eeri~~l~~lr~l~~~~~~v 231 (328)
T Consensus 109 np~~l~~~---------------~~~fG~q~Iv~siD~k~~~~~~~~~~i~~~g~~~~t~~~~~~~~~~~~~~g~--gei 171 (254)
T PRK04281 109 RPDLIDEA---------------AGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEWAVEMQKRGA--GEI 171 (254)
T ss_pred CCHHHHHH---------------HHHCCCEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCC--CEE
T ss_conf 92676767---------------8755982179999888502468845999758864775449999999875299--899
Q ss_pred ECCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHHHHHC-CCEEEECCEEECCCCCCH
Q ss_conf 0541120487412445687989999999999996868721423115651656899999809-988997786651588898
Q gi|254780485|r 232 PINLLIPIPGSKFEENKKVDPIEHVRIISVARILMPKSRLRLAAGRAMMSDELQALCFFSG-ANSIFVGDTLLTAKNPSY 310 (328)
Q Consensus 232 ~~~~~~p~~gt~l~~~~~~~~~e~lr~iAi~RL~lP~~~i~i~~~~~~~~~~~~~~~L~~G-aN~~~~g~~~~t~~g~~~ 310 (328)
T Consensus 172 l~-tdI~rDGt-~~----G~d~~l~~~i~--~~--~~iPvIasGGv~~-~~di~~-~~~~~~~~~v~~g~-~~~~~~~sl 238 (254)
T PRK04281 172 LL-TGMDRDGT-KQ----GFNLPLTRAVA--EA--VDIPVIASGGVGN-VRHLIE-GITEGKADAVLAAG-IFHFGEIAI 238 (254)
T ss_pred EE-EEECCCCC-CC----CCCHHHHHHHH--HH--CCCCEEEECCCCC-HHHHHH-HHHHCCCCEEEEHH-HHHCCCCCH
T ss_conf 99-88857887-68----76869999998--61--6998999789899-999999-99808988897643-777799899
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 99999999829853
Q gi|254780485|r 311 NKDTILFNRLGLIP 324 (328)
Q Consensus 311 ~~~~~~i~~~G~~P 324 (328)
T Consensus 239 ~eak~~l~~~~i~v 252 (254)
T PRK04281 239 REAKRAMREAGIEV 252 (254)
T ss_pred HHHHHHHHHCCCCC
T ss_conf 99999999867970