HHsearch alignment for GI: 254780485 and conserved domain: PRK05301

>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=99.46  E-value=4e-11  Score=94.19  Aligned_cols=174  Identities=17%  Similarity=0.266  Sum_probs=123.8

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC
Q ss_conf             99864530786834232124335477756410006857999999999964983899730368887442899999887621
Q gi|254780485|r   54 LSKLLNIKTGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVK  133 (328)
Q Consensus        54 ~~~~in~~TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~  133 (328)
T Consensus        17 ~~v~~el-T~~CNL~C~hCy~~~~~~---~~~~ELs~~e~~~~id~l~~~Gv~~v~~-tGGEPllr~D~---~ei~~~a~   88 (375)
T PRK05301         17 LWLLAEL-TYRCPLQCPYCSNPLDLA---RHGAELSTAEWIRVLREARALGVLQLHF-SGGEPLLRKDL---EELVAHAR   88 (375)
T ss_pred             EEEEEHH-HCHHCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHCCCCEEEE-CCCCCCCCCCH---HHHHHHHH
T ss_conf             2843573-140078784669850048---7657899999999999999869988996-18652456689---99999999


Q ss_pred             CCCCCEEE--ECCCCCHHHHHHHHCCCCCEEEEECCC-CHHHHHCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf             36883241--025699999998741576069751343-7777320588-8898999999999998798557707866898
Q gi|254780485|r  134 SLGLETCM--TLGMLSFEQAQILSKAGLDYYNHNIDT-SERFYPHVTT-THTFEDRLQTLENVRKSGIKVCCGGILGLGE  209 (328)
Q Consensus       134 ~~~~~i~~--~~g~~~~~~~~~Lk~aG~~~~~~~let-~~~~~~~~~~-~~~~~~~l~~~~~a~~~G~~~~sg~l~G~gE  209 (328)
T Consensus        89 ~~G~~~~l~TNG~lit~~~a~~L~~~gl~~v~vSlDg~~~e~hD~~rG~~G~f~~~~~~i~~l~~~Gi~v~i~~ti~-r~  167 (375)
T PRK05301         89 RLGLYTNLITSGVGLTEARLAALKAAGLDHIQLSFQDSDPELADRIAGTRGAFAQKLEVARLVKAHGYPLTLNAVIH-RH  167 (375)
T ss_pred             HCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEC-CC
T ss_conf             76975899606745579999999850998899956779877877763788629999999999997498169998723-05


Q ss_pred             CHHHHHHHHHHHHHCCCCCCEEECCCEEE
Q ss_conf             99999999999974088886020541120
Q gi|254780485|r  210 MIDDRIDMLLTLANLSTPPESIPINLLIP  238 (328)
Q Consensus       210 t~eeri~~l~~lr~l~~~~~~v~~~~~~p  238 (328)
T Consensus       168 N~~~l~~i~~la~~lGv~--~~~l~~~~~  194 (375)
T PRK05301        168 NIDQIPRIIELAVELGAD--RLELANTQY  194 (375)
T ss_pred             CHHHHHHHHHHHHHCCCC--EEEEEEEEE
T ss_conf             688899999999972998--289876567