HHsearch alignment for GI: 254780485 and conserved domain: PRK05301
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=99.46 E-value=4e-11 Score=94.19 Aligned_cols=174 Identities=17% Similarity=0.266 Sum_probs=123.8
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 99864530786834232124335477756410006857999999999964983899730368887442899999887621
Q gi|254780485|r 54 LSKLLNIKTGGCPENCGYCNQSVHNKSKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVK 133 (328)
Q Consensus 54 ~~~~in~~TN~C~~~C~fCaf~~~~~~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~ 133 (328)
T Consensus 17 ~~v~~el-T~~CNL~C~hCy~~~~~~---~~~~ELs~~e~~~~id~l~~~Gv~~v~~-tGGEPllr~D~---~ei~~~a~ 88 (375)
T PRK05301 17 LWLLAEL-TYRCPLQCPYCSNPLDLA---RHGAELSTAEWIRVLREARALGVLQLHF-SGGEPLLRKDL---EELVAHAR 88 (375)
T ss_pred EEEEEHH-HCHHCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHCCCCEEEE-CCCCCCCCCCH---HHHHHHHH
T ss_conf 2843573-140078784669850048---7657899999999999999869988996-18652456689---99999999
Q ss_pred CCCCCEEE--ECCCCCHHHHHHHHCCCCCEEEEECCC-CHHHHHCCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf 36883241--025699999998741576069751343-7777320588-8898999999999998798557707866898
Q gi|254780485|r 134 SLGLETCM--TLGMLSFEQAQILSKAGLDYYNHNIDT-SERFYPHVTT-THTFEDRLQTLENVRKSGIKVCCGGILGLGE 209 (328)
Q Consensus 134 ~~~~~i~~--~~g~~~~~~~~~Lk~aG~~~~~~~let-~~~~~~~~~~-~~~~~~~l~~~~~a~~~G~~~~sg~l~G~gE 209 (328)
T Consensus 89 ~~G~~~~l~TNG~lit~~~a~~L~~~gl~~v~vSlDg~~~e~hD~~rG~~G~f~~~~~~i~~l~~~Gi~v~i~~ti~-r~ 167 (375)
T PRK05301 89 RLGLYTNLITSGVGLTEARLAALKAAGLDHIQLSFQDSDPELADRIAGTRGAFAQKLEVARLVKAHGYPLTLNAVIH-RH 167 (375)
T ss_pred HCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEC-CC
T ss_conf 76975899606745579999999850998899956779877877763788629999999999997498169998723-05
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEECCCEEE
Q ss_conf 99999999999974088886020541120
Q gi|254780485|r 210 MIDDRIDMLLTLANLSTPPESIPINLLIP 238 (328)
Q Consensus 210 t~eeri~~l~~lr~l~~~~~~v~~~~~~p 238 (328)
T Consensus 168 N~~~l~~i~~la~~lGv~--~~~l~~~~~ 194 (375)
T PRK05301 168 NIDQIPRIIELAVELGAD--RLELANTQY 194 (375)
T ss_pred CHHHHHHHHHHHHHCCCC--EEEEEEEEE
T ss_conf 688899999999972998--289876567