HHsearch alignment for GI: 254780485 and conserved domain: PRK05692
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional.
Probab=97.85 E-value=0.0032 Score=41.25 Aligned_cols=219 Identities=15% Similarity=0.158 Sum_probs=133.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECCCCC---CCCCCHHHHHHHHHHHCCC-CCCEEEECCCCCHHHHHHHHCCCCCE
Q ss_conf 0068579999999999649838997303688---8744289999988762136-88324102569999999874157606
Q gi|254780485|r 86 KLINVDQVLKEAKNAKENGATRYCMGAAWRE---PKERDLSIIVDMIKGVKSL-GLETCMTLGMLSFEQAQILSKAGLDY 161 (328)
Q Consensus 86 ~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~---~~~~~~~~~~e~i~~i~~~-~~~i~~~~g~~~~~~~~~Lk~aG~~~ 161 (328)
T Consensus 21 ~~~s~e~K~~ia~~L~~~Gv~~IEvgsfvspk~vP~~~d~~e---v~~~i~~~~~~~~--~~l~~n~~g~~~A~~~g~~~ 95 (287)
T PRK05692 21 RFIPTADKIALIDRLSAAGLSYIEVASFVSPKWVPQMADAAE---VMAGIQRRPGVTY--AALTPNLKGLEAALAAGADE 95 (287)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCHHH---HHHHHHCCCCCEE--EEECCCHHHHHHHHHCCCCE
T ss_conf 984999999999999984999999668778230213167999---9987640679678--66436404279999779898
Q ss_pred EEEECCCCHHHHHC-CCCC--CCHHHHHHHHHHHHHCCCCCCC--EEEECC---CC-CHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 97513437777320-5888--8989999999999987985577--078668---98-99999999999974088886020
Q gi|254780485|r 162 YNHNIDTSERFYPH-VTTT--HTFEDRLQTLENVRKSGIKVCC--GGILGL---GE-MIDDRIDMLLTLANLSTPPESIP 232 (328)
Q Consensus 162 ~~~~let~~~~~~~-~~~~--~~~~~~l~~~~~a~~~G~~~~s--g~l~G~---gE-t~eeri~~l~~lr~l~~~~~~v~ 232 (328)
T Consensus 96 i~i~~~~Sd~h~~~nl~~t~~e~l~~~~~~i~~a~~~g~~v~~~i~~afg~p~~~~~~~~~l~~~~~~~~~~Ga~--~I- 172 (287)
T PRK05692 96 VAVFASASEAFSQKNINCSIAESLARFEPVAEAAKQAGVRVRGYVSCVLGCPYEGEVPPEAVADVAERLFALGCD--EI- 172 (287)
T ss_pred EEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC--EE-
T ss_conf 999974179999987479999999999999999997698799987401367646864899999999999857997--85-
Q ss_pred CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHH--HCHHHHHHHHHHCCC---EEEE--C------
Q ss_conf 54112048741244568798999999999999686872142311565--165689999980998---8997--7------
Q gi|254780485|r 233 INLLIPIPGSKFEENKKVDPIEHVRIISVARILMPKSRLRLAAGRAM--MSDELQALCFFSGAN---SIFV--G------ 299 (328)
Q Consensus 233 ~~~~~p~~gt~l~~~~~~~~~e~lr~iAi~RL~lP~~~i~i~~~~~~--~~~~~~~~~L~~GaN---~~~~--g------ 299 (328)
T Consensus 173 -----~laDT----~G~a~P~~v~~~i~~v~~~~~~~~i~~H~-Hnd~Gma~AN~laAv~aGa~~vd~tv~GlGgcPfap 242 (287)
T PRK05692 173 -----SLGDT----IGVGTPGQVRRVLEAVLAEFPAERLAGHF-HDTYGQALANIYASLEEGITVFDASVGGLGGCPYAP 242 (287)
T ss_pred -----ECCCC----CCCCCHHHHHHHHHHHHHHCCCCCEEEEE-CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf -----44765----56669999999999999866887235674-487306999999999809998988554777999999
Q ss_pred CEEECCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 86651588898999999998298532
Q gi|254780485|r 300 DTLLTAKNPSYNKDTILFNRLGLIPD 325 (328)
Q Consensus 300 ~~~~t~~g~~~~~~~~~i~~~G~~P~ 325 (328)
T Consensus 243 ~---~aGN~~tE~lv~~l~~~G~~Tg 265 (287)
T PRK05692 243 G---ATGNVATEDVLYMLHGLGIETG 265 (287)
T ss_pred C---CCCCHHHHHHHHHHHHCCCCCC
T ss_conf 8---7678669999999996599669