HHsearch alignment for GI: 254780485 and conserved domain: PRK09240

>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed.
Probab=100.00  E-value=0  Score=351.06  Aligned_cols=309  Identities=20%  Similarity=0.286  Sum_probs=264.8

Q ss_pred             HHHHCCCCCCCCHHHHHHHHCCC---HHHHHH-HHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             34200234478999999997399---189999-99999888628985699986453078683423212433547775641
Q gi|254780485|r    9 EENPTKKPKVWTSKEVFQIYNMP---FNDLLF-WSHTVHRKNFEPNHIQLSKLLNIKTGGCPENCGYCNQSVHNKSKLKA   84 (328)
Q Consensus         9 ~~~~~~~~e~ls~eea~~L~~~~---~~el~~-~Aa~~~r~~~~g~~V~~~~~in~~TN~C~~~C~fCaf~~~~~~~~~~   84 (328)
T Consensus        26 dV~~aL~k~~l~~~d~~~LLsp~a~~~lE~ma~~A~~l-t~~~fG~~I~LfaPLYl-SN~C~N~C~YCGf~~~N~--i~R  101 (371)
T PRK09240         26 DVERALNKDKLDLEDLMALLSPAAEPYLEEMAQRAQAL-TRQRFGNTISLYTPLYL-SNLCANDCTYCGFSMSNK--IKR  101 (371)
T ss_pred             HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHHCCCEEEEEECHHH-HCCCCCCCEECCCCCCCC--CCC
T ss_conf             99999715799989999886974788999999999999-99873985899850440-222177887589867787--630


Q ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEE
Q ss_conf             00068579999999999649838997303688874428999998876213688324102569999999874157606975
Q gi|254780485|r   85 SKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLGLETCMTLGMLSFEQAQILSKAGLDYYNH  164 (328)
Q Consensus        85 ~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~~~i~~~~g~~~~~~~~~Lk~aG~~~~~~  164 (328)
T Consensus       102 ~-~Ls~eEI~~E~~ai~~~G~k~ILLvtGE-~~~~~~~~Yi~~~v~~ik~~f~~v~iev~Pl~~eeY~~L~~aG~d~~~v  179 (371)
T PRK09240        102 K-TLDEEEIEREMAAIKKLGFEHILLVTGE-HEAKVGVDYIRRALPLAREYFSSVAIEVQPLSEEEYAELVELGLDGVTV  179 (371)
T ss_pred             C-CCCHHHHHHHHHHHHHCCCCEEEEECCC-CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCEEEE
T ss_conf             0-2899999999999997695238854057-8776988999999999997567407995259989999999859986999


Q ss_pred             ECCC-CHHHHHCCC---CCCCHHHHHHHHHHHHHCCC-CCCCEEEECCCCCHHHHHHHHHHHHHCCCC----CCEEECCC
Q ss_conf             1343-777732058---88898999999999998798-557707866898999999999999740888----86020541
Q gi|254780485|r  165 NIDT-SERFYPHVT---TTHTFEDRLQTLENVRKSGI-KVCCGGILGLGEMIDDRIDMLLTLANLSTP----PESIPINL  235 (328)
Q Consensus       165 ~let-~~~~~~~~~---~~~~~~~~l~~~~~a~~~G~-~~~sg~l~G~gEt~eeri~~l~~lr~l~~~----~~~v~~~~  235 (328)
T Consensus       180 yQETY~~~~Y~~lHp~G~K~dy~~RL~a~eRa~~aGi~~vgiGaLlGL~dwr~e~~~~~~Ha~~L~~~y~~~~~siS~PR  259 (371)
T PRK09240        180 YQETYNPATYAKHHLRGPKQDFFYRLETPERAARAGIRKIGLGALLGLSDWRTDALMTALHLRYLQRKYWRARYSISFPR  259 (371)
T ss_pred             EEHHCCHHHHHHHCCCCCCCCCHHHCCCHHHHHHCCCCEECEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf             60325999999858899854525452378889875997036110226546899999999999999987799875763575


Q ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHHHHHCCCEEEECCE--------------
Q ss_conf             120487412445687989999999999996868721423115651656899999809988997786--------------
Q gi|254780485|r  236 LIPIPGSKFEENKKVDPIEHVRIISVARILMPKSRLRLAAGRAMMSDELQALCFFSGANSIFVGDT--------------  301 (328)
Q Consensus       236 ~~p~~gt~l~~~~~~~~~e~lr~iAi~RL~lP~~~i~i~~~~~~~~~~~~~~~L~~GaN~~~~g~~--------------  301 (328)
T Consensus       260 lrP~~g~-~~p~~~vsD~~l~q~i~a~Rl~~P~~gi~lST-RE--~~~~Rd~li~lGvT~mSAgs~T~~GGy~~~~~~~~  335 (371)
T PRK09240        260 LRPCTGG-FEPKSIVSDRQLVQLICAFRLFLPDVEISLST-RE--SPEFRDNLIPLGITKMSAGSSTQPGGYADPEKELE  335 (371)
T ss_pred             CCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEC-CC--CHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             3368899-88986578899999999999866555616864-78--98999888852560255555468877789998866


Q ss_pred             -EECCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             -65158889899999999829853247
Q gi|254780485|r  302 -LLTAKNPSYNKDTILFNRLGLIPDLS  327 (328)
Q Consensus       302 -~~t~~g~~~~~~~~~i~~~G~~P~~~  327 (328)
T Consensus       336 QF~i~D~Rs~~Ev~~~l~~~Gy~Pv~k  362 (371)
T PRK09240        336 QFEISDDRSVEEVAAALRAQGLQPVWK  362 (371)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCEECCC
T ss_conf             653799989999999999879910316