HHsearch alignment for GI: 254780485 and conserved domain: PRK09613
>PRK09613 thiH thiamine biosynthesis protein ThiH; Reviewed.
Probab=100.00 E-value=0 Score=343.48 Aligned_cols=317 Identities=22% Similarity=0.329 Sum_probs=271.0
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHH---HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 557321342002344789999999973991899---99999998886289856999864530786834232124335477
Q gi|254780485|r 3 RSTVVPEENPTKKPKVWTSKEVFQIYNMPFNDL---LFWSHTVHRKNFEPNHIQLSKLLNIKTGGCPENCGYCNQSVHNK 79 (328)
Q Consensus 3 ~~~~~~~~~~~~~~e~ls~eea~~L~~~~~~el---~~~Aa~~~r~~~~g~~V~~~~~in~~TN~C~~~C~fCaf~~~~~ 79 (328)
T Consensus 30 ~~~v~~il~Ka~~~~gL~~~e~A~LL~~~d~e~~eem~~~A~~ik~~~yGnrIvLFAPLYl-SN~C~N~C~YCGF~~~Nk 108 (471)
T PRK09613 30 KEEIREIIEKALEKEGLSPEETAVLLNVEDEELLEEIFKAAREIKEKIYGNRIVLFAPLYI-SNYCVNNCVYCGFRRSNK 108 (471)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHH-HCCCCCCCEECCCCCCCC
T ss_conf 8999999999986289999999999558998999999999999999861875899854112-033367875378747787
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC------EEEECCCCCHHHHHH
Q ss_conf 75641000685799999999996498389973036888744289999988762136883------241025699999998
Q gi|254780485|r 80 SKLKASKLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLGLE------TCMTLGMLSFEQAQI 153 (328)
Q Consensus 80 ~~~~~~~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~~~------i~~~~g~~~~~~~~~ 153 (328)
T Consensus 109 ~-i~R-k~Lt~eEi~~E~~al~~~G~krilLvtGE-~p~~~~~~Yi~~~i~~iy~~~~~~g~IrrvnVei~Pl~~eeY~~ 185 (471)
T PRK09613 109 E-LKR-KKLTQEEIREEVKALESMGHKRLALVAGE-HPVNCDIDYILESIKTIYSTKNGNGEIRRVNVNIAPTTVENYKK 185 (471)
T ss_pred C-CCC-CCCCHHHHHHHHHHHHHCCCCEEEEEECC-CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHH
T ss_conf 7-763-37899999999999997697318987146-88879889999999999875246785336889944798699999
Q ss_pred HHCCCCCEEEEECCC-CHHHHHCCC---CCCCHHHHHHHHHHHHHCCC-CCCCEEEECCCCCHHHHHHHHHHHHHCCC--
Q ss_conf 741576069751343-777732058---88898999999999998798-55770786689899999999999974088--
Q gi|254780485|r 154 LSKAGLDYYNHNIDT-SERFYPHVT---TTHTFEDRLQTLENVRKSGI-KVCCGGILGLGEMIDDRIDMLLTLANLST-- 226 (328)
Q Consensus 154 Lk~aG~~~~~~~let-~~~~~~~~~---~~~~~~~~l~~~~~a~~~G~-~~~sg~l~G~gEt~eeri~~l~~lr~l~~-- 226 (328)
T Consensus 186 L~~aGigt~~vfQETYh~~tY~~~Hp~GpK~dy~~RL~a~dRA~~AGi~dVGiGaLlGL~dwr~e~~~l~~Ha~~Le~~y 265 (471)
T PRK09613 186 LKEAGIGTYQLFQETYHKPTYEKMHPAGPKSNYDWRLTAMDRAMEAGIDDVGIGVLFGLYDYRFEVLGLLMHAEHLEERF 265 (471)
T ss_pred HHHCCCCEEEEEEEECCHHHHHHHCCCCCCCCCHHHCCCHHHHHHCCCCEECCHHEECCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99869996999863078878998587898656333415788898759971360020265368999999999999999975
Q ss_pred --CCCEEECCCEEECCCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHHHHHHHCCCEEEECCE-
Q ss_conf --88602054112048741244--5687989999999999996868721423115651656899999809988997786-
Q gi|254780485|r 227 --PPESIPINLLIPIPGSKFEE--NKKVDPIEHVRIISVARILMPKSRLRLAAGRAMMSDELQALCFFSGANSIFVGDT- 301 (328)
Q Consensus 227 --~~~~v~~~~~~p~~gt~l~~--~~~~~~~e~lr~iAi~RL~lP~~~i~i~~~~~~~~~~~~~~~L~~GaN~~~~g~~- 301 (328)
T Consensus 266 g~g~hTIS~PRlrPa~g~~~~~~pp~~VsD~~f~qiiaa~RL~vP~tGiilST-RE--~~~~Rd~li~lGVsqmSAGS~T 342 (471)
T PRK09613 266 GVGPHTISVPRLEPALGSDLSENPPYLVSDEDFKKIVAILRLAVPYTGMILST-RE--SAELRDEVLELGVSQISAGSRT 342 (471)
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEC-CC--CHHHHHHHHHHCCEEECCCCCC
T ss_conf 99985663675436899976678998679899999999999856545736853-79--9889998885346123345536
Q ss_pred -----EE------------CCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf -----65------------15888989999999982985324
Q gi|254780485|r 302 -----LL------------TAKNPSYNKDTILFNRLGLIPDL 326 (328)
Q Consensus 302 -----~~------------t~~g~~~~~~~~~i~~~G~~P~~ 326 (328)
T Consensus 343 ~vGGY~~~~~~~~~~~QF~i~D~Rs~dEvi~~l~~~gyiPSf 384 (471)
T PRK09613 343 GVGGYSESEQEEEEKAQFELGDHRSLDEVIRELCEMGYIPSF 384 (471)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 887667655677667886678998999999999977997730