HHsearch alignment for GI: 254780485 and conserved domain: PRK11858

>PRK11858 aksA trans-homoaconitate synthase; Reviewed.
Probab=96.19  E-value=0.12  Score=30.81  Aligned_cols=215  Identities=14%  Similarity=0.151  Sum_probs=120.2

Q ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCC--CEEEECCCCCHHHHHHHHCCCCCEEE
Q ss_conf             0068579999999999649838997303688874428999998876213688--32410256999999987415760697
Q gi|254780485|r   86 KLINVDQVLKEAKNAKENGATRYCMGAAWREPKERDLSIIVDMIKGVKSLGL--ETCMTLGMLSFEQAQILSKAGLDYYN  163 (328)
Q Consensus        86 ~~~~~Eei~~~a~~~~~~G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~~~~--~i~~~~g~~~~~~~~~Lk~aG~~~~~  163 (328)
T Consensus        21 ~~fs~~~K~~ia~~L~~~GV~~IEvG--~P~~~~~e~----~~~~~i~~~~l~~~i~~-~~R~~~~di~~a~~~g~~~v~   93 (378)
T PRK11858         21 VVFTNEEKLAIARMLDEIGVDQIEAG--FPAVSEDEK----EAIKAIAKLGLNASILA-WNRAVKSDIDASIDCGVDAVH   93 (378)
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEE--CCCCCCCHH----HHHHHHHHCCCCCEEEE-ECCCCHHHHHHHHHCCCCEEE
T ss_conf             99999999999999998198999994--777783489----99999985679845887-403578779999857969899


Q ss_pred             EECCCCHHHHHCCCCCCCHHH----HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCEEEC
Q ss_conf             513437777320588889899----9999999998798557707866898999999999999740888860205411204
Q gi|254780485|r  164 HNIDTSERFYPHVTTTHTFED----RLQTLENVRKSGIKVCCGGILGLGEMIDDRIDMLLTLANLSTPPESIPINLLIPI  239 (328)
Q Consensus       164 ~~let~~~~~~~~~~~~~~~~----~l~~~~~a~~~G~~~~sg~l~G~gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~  239 (328)
T Consensus        94 i~~~~Sd~h~~~~l-~~t~~e~l~~~~~~v~~Ak~~Gl~v~f~~eD~~r~~~~~l~~~~~~a~~~Ga--d~I------~l  164 (378)
T PRK11858         94 IFIATSDIHLKYKL-KKTREEVLERLVEAVEYAKDHGLYVSFSAEDASRTDLDFLIEAAKAAEEAGA--DRV------RF  164 (378)
T ss_pred             EEECCCHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC--CEE------EE
T ss_conf             99606799999996-8998999999999999999769869994401256899999999999997499--899------96


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHC--HHHHHHHHHHCCC---EEE--ECCEEECCCCCCHHH
Q ss_conf             874124456879899999999999968687214231156516--5689999980998---899--778665158889899
Q gi|254780485|r  240 PGSKFEENKKVDPIEHVRIISVARILMPKSRLRLAAGRAMMS--DELQALCFFSGAN---SIF--VGDTLLTAKNPSYNK  312 (328)
Q Consensus       240 ~gt~l~~~~~~~~~e~lr~iAi~RL~lP~~~i~i~~~~~~~~--~~~~~~~L~~GaN---~~~--~g~~~~t~~g~~~~~  312 (328)
T Consensus       165 ~DT----~G~~~P~~v~~~v~~l~~~~~-~~i~~H~-HNd~GlAvANalaAv~AGa~~v~~Tv~GiGE---RaGNa~le~  235 (378)
T PRK11858        165 CDT----VGILDPFTMYELVKELVEAVD-IPIEVHC-HNDFGMATANAIAGIEAGATQVHTTVNGLGE---RAGNAALEE  235 (378)
T ss_pred             CCC----CCCCCHHHHHHHHHHHHHHCC-CCEEEEE-ECCCCHHHHHHHHHHHHCCCEEEEEEEEEEC---CCCCCCHHH
T ss_conf             365----566699999999999997269-8559997-0775559999999998099989987544654---656614999


Q ss_pred             HHHHHH-HCCCCCC
Q ss_conf             999999-8298532
Q gi|254780485|r  313 DTILFN-RLGLIPD  325 (328)
Q Consensus       313 ~~~~i~-~~G~~P~  325 (328)
T Consensus       236 v~~~L~~~~~~~~~  249 (378)
T PRK11858        236 VVMALKYLYGIDLG  249 (378)
T ss_pred             HHHHHHHHCCCCCC
T ss_conf             99999974497766