HHsearch alignment for GI: 254780485 and conserved domain: TIGR02493
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme; InterPro: IPR012838 Members of this family are iron-sulphur proteins with a radical-SAM domain. A single glycine residue in 2.3.1.54 from EC, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of a proton from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue .; GO: 0043365 [formate-C-acetyltransferase]-activating enzyme activity.
Probab=98.68 E-value=4.2e-06 Score=60.58 Aligned_cols=193 Identities=22% Similarity=0.331 Sum_probs=132.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CC-CCCCHHHHHHHHHHHHH----C-CCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 7868342321243354777564-10-00685799999999996----4-9838997303688874428999998876213
Q gi|254780485|r 62 TGGCPENCGYCNQSVHNKSKLK-AS-KLINVDQVLKEAKNAKE----N-GATRYCMGAAWREPKERDLSIIVDMIKGVKS 134 (328)
Q Consensus 62 TN~C~~~C~fCaf~~~~~~~~~-~~-~~~~~Eei~~~a~~~~~----~-G~~~~~l~~~~~~~~~~~~~~~~e~i~~i~~ 134 (328)
T Consensus 22 mqGC~lRC~YChNP---DTW~~~~~G~~~t~~el~~e~~~yk~f~~~sGGGvT---~SGGEPl--lQ~~F~~~~f~~cK~ 93 (243)
T TIGR02493 22 MQGCPLRCQYCHNP---DTWDLKKGGTEVTVEELIKEVKSYKDFFKASGGGVT---VSGGEPL--LQPEFVLELFKACKK 93 (243)
T ss_pred ECCHHHHHHHCCCC---CCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCCEE---EECCCCC--CCHHHHHHHHHHHHH
T ss_conf 43536775305898---743358878120789999999989988720799589---8689502--016999999999998
Q ss_pred -CCCCEEE-ECC----CCC--HHHHHHHHCCCCCEEEEECCC-CHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCE-EE
Q ss_conf -6883241-025----699--999998741576069751343-7777320588889899999999999879855770-78
Q gi|254780485|r 135 -LGLETCM-TLG----MLS--FEQAQILSKAGLDYYNHNIDT-SERFYPHVTTTHTFEDRLQTLENVRKSGIKVCCG-GI 204 (328)
Q Consensus 135 -~~~~i~~-~~g----~~~--~~~~~~Lk~aG~~~~~~~let-~~~~~~~~~~~~~~~~~l~~~~~a~~~G~~~~sg-~l 204 (328)
T Consensus 94 ~~GiHTclDT~GGCftf~~~~~~~~~~lLe~-TDLvLLDiK~~~~~~y~~LTg~~~~~ptl~Fa~~L~~~~kP~WiRYVl 172 (243)
T TIGR02493 94 ELGIHTCLDTSGGCFTFLGGFTEAADELLEV-TDLVLLDIKHIDPEKYKKLTGVKSLEPTLEFAKYLAKRNKPIWIRYVL 172 (243)
T ss_pred HCCCEEEEECCCCHHHHHCCHHHHHHHHHHC-CCEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
T ss_conf 5698388744883433412124899975100-587886234368124000145677524589999999658988999986
Q ss_pred E-CCCCCHHHHHHHHHHHHHCCCCCCEE---ECCCEEECC------CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 6-68989999999999997408888602---054112048------74124456879899999999999
Q gi|254780485|r 205 L-GLGEMIDDRIDMLLTLANLSTPPESI---PINLLIPIP------GSKFEENKKVDPIEHVRIISVAR 263 (328)
Q Consensus 205 ~-G~gEt~eeri~~l~~lr~l~~~~~~v---~~~~~~p~~------gt~l~~~~~~~~~e~lr~iAi~R 263 (328)
T Consensus 173 VPGyTD~~eDi~~l~~fv~~~~~averVe~LPYH~LG~~KWe~~g~~Y~L~~~~~p~~e~~~~~~~~~~ 241 (243)
T TIGR02493 173 VPGYTDSEEDIEALAEFVKTLPNAVERVEVLPYHQLGVYKWEALGIEYKLEGVKPPNKEQLERIKEIFK 241 (243)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 588779989999999999746992799865688602110387668975888889879899999999973