HHsearch alignment for GI: 254780485 and conserved domain: TIGR02495
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro: IPR012840 This enzyme is a member of the radical-SAM family. It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, IPR009161 from INTERPRO) and presumably fulfils the identical function as NrdG , , which utilises S-adenosyl methionine, an iron-sulphur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centred radical in NrdD..
Probab=98.21 E-value=4.1e-05 Score=53.95 Aligned_cols=158 Identities=20% Similarity=0.316 Sum_probs=111.3
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHCCC-EEEEEECCCCCCCCCCHHH-HHHHHHH
Q ss_conf 6453078683423212433547775---641000685799999999996498-3899730368887442899-9998876
Q gi|254780485|r 57 LLNIKTGGCPENCGYCNQSVHNKSK---LKASKLINVDQVLKEAKNAKENGA-TRYCMGAAWREPKERDLSI-IVDMIKG 131 (328)
Q Consensus 57 ~in~~TN~C~~~C~fCaf~~~~~~~---~~~~~~~~~Eei~~~a~~~~~~G~-~~~~l~~~~~~~~~~~~~~-~~e~i~~ 131 (328)
T Consensus 20 ~iF--~~GCn~~CpyC----HN~~~~~~~~~~~~~~~e~~~~~L~~--R~~ll~gVVi-tGGEptl---Q~~eL~d~~~~ 87 (220)
T TIGR02495 20 TIF--FQGCNLKCPYC----HNSELLIPRKGSGEIELEELLEFLRR--RQGLLDGVVI-TGGEPTL---QAGELGDFLRE 87 (220)
T ss_pred EEE--ECCCCCCCCCC----CCCCCHHHHCCCCCCCHHHHHHHHHH--CCCCEEEEEE-ECCCHHH---HHHHHHHHHHH
T ss_conf 887--02788998788----88764002005761027779999873--1342105787-2875323---67778999999
Q ss_pred HCC-CCCCEEEECCCCCHHHHHHHHCCC-CCEEEEECCCCHHHHHCCCCC--------------CC----HHHHHHHHHH
Q ss_conf 213-688324102569999999874157-606975134377773205888--------------89----8999999999
Q gi|254780485|r 132 VKS-LGLETCMTLGMLSFEQAQILSKAG-LDYYNHNIDTSERFYPHVTTT--------------HT----FEDRLQTLEN 191 (328)
Q Consensus 132 i~~-~~~~i~~~~g~~~~~~~~~Lk~aG-~~~~~~~let~~~~~~~~~~~--------------~~----~~~~l~~~~~ 191 (328)
T Consensus 88 v~~nlGf~vkLdTNG~~P~~L~~ll~~gLvD~va~D~Kap~~~y~~~~G~~~~~~~~~tnisPsrtPe~l~~~~~~SlEi 167 (220)
T TIGR02495 88 VRENLGFEVKLDTNGSNPRVLEELLEEGLVDYVAMDVKAPPEKYGELYGREKNAAKKETNISPSRTPEKLLKNILKSLEI 167 (220)
T ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99865927856067886789999986048757875014786567400063321003532468775658999998755675
Q ss_pred HHHCC----CC--CCCEEEECCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99879----85--5770786689899999999999974088
Q gi|254780485|r 192 VRKSG----IK--VCCGGILGLGEMIDDRIDMLLTLANLST 226 (328)
Q Consensus 192 a~~~G----~~--~~sg~l~G~gEt~eeri~~l~~lr~l~~ 226 (328)
T Consensus 168 l~~s~GCGGi~fE~RTTV~~~~~~Geed~~ei~~~i~~~~~ 208 (220)
T TIGR02495 168 LLESGGCGGIEFELRTTVVRGLLDGEEDLAEIATRIKENGV 208 (220)
T ss_pred HHHCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHHHCCCCC
T ss_conf 54247868865324456552541652789999976322440