HHsearch alignment for GI: 254780485 and conserved domain: pfam10113

>pfam10113 Fibrillarin_2 Fibrillarin-like archaeal protein. Members of this family of proteins include archaeal fibrillarin homologs.

Probab=97.02  E-value=0.0084  Score=38.45  Aligned_cols=105  Identities=23%  Similarity=0.347  Sum_probs=77.6

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf             89899999999999879855770786689899999999999974088886020541120487412445687989999999
Q gi|254780485|r  180 HTFEDRLQTLENVRKSGIKVCCGGILGLGEMIDDRIDMLLTLANLSTPPESIPINLLIPIPGSKFEENKKVDPIEHVRII  259 (328)
Q Consensus       180 ~~~~~~l~~~~~a~~~G~~~~sg~l~G~gEt~eeri~~l~~lr~l~~~~~~v~~~~~~p~~gt~l~~~~~~~~~e~lr~i  259 (328)
T Consensus       203 Apl~Eme~Va~~A~k~gkGvEa--I~hiGDGyDdLI~G~~a~~dl~vDv-------fV-vEGgPFNrakd-rl~aFakaV  271 (505)
T pfam10113       203 APLDEMKEVAETARKYGKGVEA--IFHVGDGYDDLITGLKAALDLDVDV-------FV-VEGGPFNRAKD-RLKAFARAV  271 (505)
T ss_pred             CCHHHHHHHHHHHHHHCCCCEE--EEEECCCHHHHHHHHHHHHHCCCCE-------EE-EECCCCCCCCC-HHHHHHHHH
T ss_conf             8879999999999984878348--9971477488999999876158758-------99-80787654433-689999888


Q ss_pred             HHHHHHCCCCCCEEEEHHHHHCHHHHHHHHHHCCCEEEEC
Q ss_conf             9999968687214231156516568999998099889977
Q gi|254780485|r  260 SVARILMPKSRLRLAAGRAMMSDELQALCFFSGANSIFVG  299 (328)
Q Consensus       260 Ai~RL~lP~~~i~i~~~~~~~~~~~~~~~L~~GaN~~~~g  299 (328)
T Consensus       272 a~sRIL~~G~VVaTNGAYE----dEcRiGLRsGLN~iitG  307 (505)
T pfam10113       272 AASRILVPGKVVATNGAYE----DECRVGLRAGLNAILTG  307 (505)
T ss_pred             HHHHEECCCCEEECCCCHH----HHHHHHHHHCCCEEECC
T ss_conf             8751000684873276107----77888776144311116