HHsearch alignment for GI: 254780486 and conserved domain: COG0076
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=99.35 E-value=4.4e-09 Score=76.78 Aligned_cols=284 Identities=20% Similarity=0.222 Sum_probs=157.1
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCC-C--CEEEECCCCHHHHHHHHHHCC-----
Q ss_conf 889999999999863786887224436885899999999----8401288-8--516741660245655666316-----
Q gi|254780486|r 45 STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE----AADFFGF-E--KMLYFGSGYAANMAILSTLPQ----- 112 (381)
Q Consensus 45 ~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~----lA~~~g~-e--~al~~~sG~~An~~~i~~l~~----- 112 (381)
T Consensus 75 ~~~a~~~~~~~~~-~nl~d~~~~p-------~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~ 146 (460)
T COG0076 75 PPVAAELLVSALN-KNLGDPDESP-------AAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKR 146 (460)
T ss_pred HHHHHHHHHHHHH-CCCCCCCCCC-------CHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 7999999999873-4799812383-------1588899999999999579976606796170799999999999998766
Q ss_pred C---------CCCCCHHHHCCHHHHHHHHHCCCCCE---EEC-C--CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
Q ss_conf 8---------97100454202677526664087640---305-6--8814789976431000247860797146215766
Q gi|254780486|r 113 A---------TDLIVYDKLVHASIREGINSGKAQAI---AIP-H--NNINSFAENINKWRKSGGKGFPWIVVESIYSMDG 177 (381)
Q Consensus 113 ~---------~d~ii~D~~~HaSi~~g~~ls~a~~~---~f~-H--nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G 177 (381)
T Consensus 147 ~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g----~vV~~aGtT-~~G 221 (460)
T COG0076 147 ALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG----VVVGTAGTT-DTG 221 (460)
T ss_pred HHHCCCCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCC----EEEEECCCC-CCC
T ss_conf 442023446887499457431209999998188523787524750568999999998746476----499972688-887
Q ss_pred CHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEE-EHHCCCCCCCCCCCCCCCCC---EEEEEECCC-CCCCCCC
Q ss_conf 134689999986313608986131122234777640110-00013465210013465653---026752451-0010000
Q gi|254780486|r 178 DKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTH-IIEERNNVIVMHSCSKALGS---SGALVGSNK-IIYDYLI 252 (381)
Q Consensus 178 ~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~-~~~~~~~~iv~~TlsKa~g~---~GG~i~~~~-~ii~~l~ 252 (381)
T Consensus 222 ~iDdi~~ia~ia~~~~i~lHVDAA~G-G~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~ 300 (460)
T COG0076 222 SIDDIEELADIAEEYGIWLHVDAAFG-GFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILI 300 (460)
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCCC-CHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHH
T ss_conf 77889999999997699789873440-02110247422535178882089988642778888706999968898467761
Q ss_pred CC---CCCE---ECCC--CCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCC-C----CCCCCEEEEEE
Q ss_conf 12---1100---0013--57750257898878988627--10224789999999987641797-8----99897289995
Q gi|254780486|r 253 NY---AKPF---IYTT--SPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKIANKKIG-F----SSQSHIQSIVI 317 (381)
Q Consensus 253 ~~---~~~~---ifst--~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~g-~----~~~s~I~~v~~ 317 (381)
T Consensus 301 ~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~-~~~~~e~~~~p~l~~V~fr~ 379 (460)
T COG0076 301 FADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELE-KLGDFELVNEPELPIVAFRL 379 (460)
T ss_pred CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCEEECCCCCEEEEEEC
T ss_conf 23667787786663688505418999999999996788899999999999999999986-47882763388650799965
Q ss_pred CCHHH-HHHHHHHHHHCCEEEEEECCC
Q ss_conf 89799-999999999779189862288
Q gi|254780486|r 318 GDNKS-CLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 318 gd~~~-a~~~~~~L~~~Gi~v~~i~~P 343 (381)
T Consensus 380 ~~~~~~~~~~~~~~~~~gw~v~~~~~~ 406 (460)
T COG0076 380 KDDEDTLADLSERLDRRGWQVPAQLLP 406 (460)
T ss_pred CCCCCCHHHHHHHHHHCCCEEECCCCC
T ss_conf 764320231478998629755201377