HHsearch alignment for GI: 254780486 and conserved domain: COG0112
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism].
Probab=99.88 E-value=4.5e-20 Score=145.29 Aligned_cols=330 Identities=19% Similarity=0.245 Sum_probs=212.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--HHHHHHHHHHH-HHCCCCCEEEEC-CCCHHHHHHHHH
Q ss_conf 03446566779889999999999863786887224436885--89999999984-012888516741-660245655666
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNY--NQHLELEEEAA-DFFGFEKMLYFG-SGYAANMAILST 109 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~--~~~~~lE~~lA-~~~g~e~al~~~-sG~~An~~~i~~ 109 (381)
T Consensus 32 IASEN~----~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~A 107 (413)
T COG0112 32 IASENF----TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLA 107 (413)
T ss_pred EECCCC----CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 512554----7899999974577530115899763567872179999999999999848875045888756899999999
Q ss_pred HCCCCCCCCHHHHCCHH-HHHHHHH--CCC--CCEEECCC------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
Q ss_conf 31689710045420267-7526664--087--64030568------8147899764310002478607971462157661
Q gi|254780486|r 110 LPQATDLIVYDKLVHAS-IREGINS--GKA--QAIAIPHN------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGD 178 (381)
Q Consensus 110 l~~~~d~ii~D~~~HaS-i~~g~~l--s~a--~~~~f~Hn------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~ 178 (381)
T Consensus 108 ll~pGD~imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kP-----Klii~G~SaY~---r 179 (413)
T COG0112 108 LLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKP-----KLIIAGGSAYS---R 179 (413)
T ss_pred HCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCC-----CEEEECCCCCC---C
T ss_conf 738988575056787876557998776640577676240633475179999999998499-----78997760355---4
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECCC-CCCCCCCCCCC
Q ss_conf 34689999986313608986131122234777640110000134652100134656-53026752451-00100001211
Q gi|254780486|r 179 KAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSNK-IIYDYLINYAK 256 (381)
Q Consensus 179 ~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~-~ii~~l~~~~~ 256 (381)
T Consensus 180 ~id~~~~reIad~VGA~L~~DmAHiaGLV-A~G---~~p~P~~~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aVF 255 (413)
T COG0112 180 PIDFKRFREIADEVGAYLMVDMAHVAGLI-AGG---VHPNPLPHADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAVF 255 (413)
T ss_pred CCCHHHHHHHHHHHCCEEEEHHHHHHHHH-HCC---CCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 46789999999871936772177888887-456---67999875526757753477899841798362999987640007
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHH-HHHHCCCCC---CCCCCEEEEEECCH-HHHHHHHHHH
Q ss_conf 00001357750257898878988627-102247899999999-876417978---99897289995897-9999999999
Q gi|254780486|r 257 PFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITD-KIANKKIGF---SSQSHIQSIVIGDN-KSCLNIAKNL 330 (381)
Q Consensus 257 ~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~-~~~~~~~g~---~~~s~I~~v~~gd~-~~a~~~~~~L 330 (381)
T Consensus 256 Pg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L 335 (413)
T COG0112 256 PGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAAL 335 (413)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf 76678827888999999999972813899999999999999999997698671588644489997246798778999999
Q ss_pred HHCCEEEEEECC---CCCCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 977918986228---88888870399962----87899999999999999998873
Q gi|254780486|r 331 QKKGFDIRAIRP---PTVPINTARLRISI----TLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 331 ~~~Gi~v~~i~~---PtVp~~~~rlRi~v----~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
T Consensus 336 ~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 336 ERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred HHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 97097652688999998887876634066888635798899999999999999550