HHsearch alignment for GI: 254780486 and conserved domain: COG0520

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].
Probab=99.86  E-value=3.8e-18  Score=133.29  Aligned_cols=321  Identities=19%  Similarity=0.246  Sum_probs=201.3

Q ss_pred             CCCCCH-HHHHHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHH-HHHHH---C
Q ss_conf             677988-999999999986378688--722443688589999999984012888--51674166024565-56663---1
Q gi|254780486|r   41 ALSSST-LLREKILSSLDSKIPIGS--GGSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMA-ILSTL---P  111 (381)
Q Consensus        41 Gl~~~p-~v~~a~~~a~~~~~g~~~--~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~-~i~~l---~  111 (381)
T Consensus        30 a~~~~p~~V~~a~~~~~-~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~  108 (405)
T COG0520          30 ATSQKPQAVLDAVAEYY-RRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSL  108 (405)
T ss_pred             CCCCCCHHHHHHHHHHH-HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHH
T ss_conf             56667889999999999-97402457554412799999999999999998199987729995983799999999702410


Q ss_pred             CCCCCCCHHHHCCHHHH---H-HHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf             68971004542026775---2-666408764030568-----81478997643100024786079714621576613468
Q gi|254780486|r  112 QATDLIVYDKLVHASIR---E-GINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPL  182 (381)
Q Consensus       112 ~~~d~ii~D~~~HaSi~---~-g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL  182 (381)
T Consensus       109 ~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~d~~~~~i-------~~~Tklvais~vSn~tG~~~pv  181 (405)
T COG0520         109 KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLI-------TPKTKLVALSHVSNVTGTVNPV  181 (405)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHC-------CCCCEEEEEECCCCCCCCCCCH
T ss_conf             689989980465520089999999875968999841899972889998646-------9994499996641675540409


Q ss_pred             HHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCC-CCCCEE-EEEECCCCCCCCCC--CCC---
Q ss_conf             99999863136089861311222347776401100001346521001346-565302-67524510010000--121---
Q gi|254780486|r  183 DDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSK-ALGSSG-ALVGSNKIIYDYLI--NYA---  255 (381)
Q Consensus       183 ~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsK-a~g~~G-G~i~~~~~ii~~l~--~~~---  255 (381)
T Consensus       182 ~~I~~la~~~ga~v~VDaaq~~~h~-~-----id-v~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~  254 (405)
T COG0520         182 KEIAELAHEHGALVLVDAAQAAGHL-P-----ID-VQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGM  254 (405)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCC-C-----CC-HHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCC
T ss_conf             9999999984998999771334756-6-----88-556189899976743257998529999866558437897778872


Q ss_pred             --------------CCEECCC-CCCCCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCC-----CCC--CCCC
Q ss_conf             --------------1000013-577502578988789886271--022478999999998764179-----789--9897
Q gi|254780486|r  256 --------------KPFIYTT-SPSPILAVVACEALKLIKRKP--ALHKSLLQLINITDKIANKKI-----GFS--SQSH  311 (381)
Q Consensus       256 --------------~~~ifst-~l~P~~~aaa~aal~~l~~~~--~~~~~l~~~~~~~~~~~~~~~-----g~~--~~s~  311 (381)
T Consensus       255 ~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~  334 (405)
T COG0520         255 IEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGG  334 (405)
T ss_pred             EEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             44014455530156415315578437889869999999998579999999999999999998548984996466346774


Q ss_pred             EEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             289995897999999999997791898622888888-----870399962878999999999999999988
Q gi|254780486|r  312 IQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPI-----NTARLRISITLNVDEPTIVKLFDILPQIIS  377 (381)
Q Consensus       312 I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~-----~~~rlRi~v~a~~t~edi~~~~~~l~~v~~  377 (381)
T Consensus       335 ~vsF~v~~-~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         335 IVSFNVKG-IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             EEEEEECC-CCHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf             69999789-59899999998678699825644326787537777579997425999999999999998741