HHsearch alignment for GI: 254780486 and conserved domain: COG1103
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only].
Probab=99.76 E-value=1.1e-15 Score=117.86 Aligned_cols=315 Identities=18% Similarity=0.241 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHCCCCCCC------CCCC-CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCH
Q ss_conf 99999999998637868872------2443-6885899999999840128885167416602456556663168971004
Q gi|254780486|r 47 LLREKILSSLDSKIPIGSGG------SRLL-CGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVY 119 (381)
Q Consensus 47 ~v~~a~~~a~~~~~g~~~~~------sr~~-~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~ 119 (381)
T Consensus 28 iLt~eArkal~-E~gDGYSvCD~C~~Grldei~kPpI~~F~~d-laeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~ 105 (382)
T COG1103 28 ILTEEARKALL-EWGDGYSVCDFCLEGRLDEITKPPIKDFLED-LAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVV 105 (382)
T ss_pred CCCHHHHHHHH-HHCCCCCHHHHHCCCCCCCCCCCCHHHHHHH-HHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 68799999999-8648863443104574110258858889998-898719863442365125679999975158988997
Q ss_pred HHHCCHHHHHHHHHCCCCCEEECCC-------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 5420267752666408764030568-------814789976431000247860797146215766134689999986313
Q gi|254780486|r 120 DKLVHASIREGINSGKAQAIAIPHN-------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDY 192 (381)
Q Consensus 120 D~~~HaSi~~g~~ls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y 192 (381)
T Consensus 106 D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~ 185 (382)
T COG1103 106 DSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREY 185 (382)
T ss_pred CCCCHHHHHHHHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC
T ss_conf 47422788999986397589667899984576688889999999862489844899963577757722167899999872
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE--EEEECCCCCCCCC-CCCCCCE-------ECCC
Q ss_conf 6089861311222347776401100001346521001346565302--6752451001000-0121100-------0013
Q gi|254780486|r 193 DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG--ALVGSNKIIYDYL-INYAKPF-------IYTT 262 (381)
Q Consensus 193 ~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G--G~i~~~~~ii~~l-~~~~~~~-------ifst 262 (381)
T Consensus 186 gvPlllN~AYt~Grmpvs~k-------e~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT 258 (382)
T COG1103 186 GVPLLLNCAYTVGRMPVSGK-------EIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCT 258 (382)
T ss_pred CCCEEEECCEEECCCCCCCC-------CCCCCEEEECCCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCCCCCEEEEECCC
T ss_conf 99568512102232113665-------56787797248530011487047751367778998631544653325661432
Q ss_pred C-CCCCHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHH-HCCCCCCCCCC-EEEEEEC--------CHHHHHHHH
Q ss_conf 5-7750257898878988627----102247899999999876-41797899897-2899958--------979999999
Q gi|254780486|r 263 S-PSPILAVVACEALKLIKRK----PALHKSLLQLINITDKIA-NKKIGFSSQSH-IQSIVIG--------DNKSCLNIA 327 (381)
Q Consensus 263 ~-l~P~~~aaa~aal~~l~~~----~~~~~~l~~~~~~~~~~~-~~~~g~~~~s~-I~~v~~g--------d~~~a~~~~ 327 (381)
T Consensus 259 ~rGap--ivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY 336 (382)
T COG1103 259 VRGAP--IVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLY 336 (382)
T ss_pred CCCCH--HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEH
T ss_conf 46843--8998740779999998788999999999999997430887177976564255337128999875767854668
Q ss_pred HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999779189862288888887039996287899999999999999998873
Q gi|254780486|r 328 KNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 328 ~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
T Consensus 337 ~ELK~RgI~G--I~~----G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 337 EELKKRGIHG--IQP----GQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred HHHHHCCCCC--CCC----CCEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHC
T ss_conf 9887658665--066----7513788875-0577999999999999999861