HHsearch alignment for GI: 254780486 and conserved domain: COG2008
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism].
Probab=99.91 E-value=1.3e-22 Score=161.05 Aligned_cols=314 Identities=18% Similarity=0.167 Sum_probs=207.8
Q ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
Q ss_conf 98034465667798899999999998637868872244368858999999998401288851674166024565566631
Q gi|254780486|r 32 WDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLP 111 (381)
Q Consensus 32 l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~ 111 (381)
T Consensus 2 ~~f~SDn~~g--~~~~m~eam~~a~-~-~~~------~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~ 71 (342)
T COG2008 2 IDFRSDNVAG--PTPEMREALAAAN-A-VGD------DVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHC 71 (342)
T ss_pred CCCCCCCCCC--CCHHHHHHHHHCC-C-CCC------CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC
T ss_conf 7355576678--7999999998552-4-578------7778888999999999998577449992684388899999864
Q ss_pred CCCCCCCHHHHCCHHHHHH---HHHCCCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH--
Q ss_conf 6897100454202677526---6640876403056-----88147899764310002478607971462157661346--
Q gi|254780486|r 112 QATDLIVYDKLVHASIREG---INSGKAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP-- 181 (381)
Q Consensus 112 ~~~d~ii~D~~~HaSi~~g---~~ls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap-- 181 (381)
T Consensus 72 ~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~-~d~~~~~~~~~~~e~~~te~GtVy~l~ 150 (342)
T COG2008 72 QPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRP-DDIHHAPTPLAVLENTATEGGTVYPLD 150 (342)
T ss_pred CCCCEEEEECCCCCEECCCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCEEEEEECCCCCCEECCHH
T ss_conf 8997699852531202356758887388543047987787399999976367-776558875079861367786664899
Q ss_pred -HHHHHHHHHHCCEEEEECCCC---CCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCC----
Q ss_conf -899999863136089861311---22234777640110000134652100134656530-267524510010000----
Q gi|254780486|r 182 -LDDLVKIANDYDGFIVVDEAH---ATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSS-GALVGSNKIIYDYLI---- 252 (381)
Q Consensus 182 -L~~i~~l~~~y~~~LivDEah---~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~-GG~i~~~~~ii~~l~---- 252 (381)
T Consensus 151 el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~---~~-~-~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK 225 (342)
T COG2008 151 ELEAISAVCKEHGLPLHMDGARLANALVALGVAL---KT-I-KSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRK 225 (342)
T ss_pred HHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCH---HH-H-HHHCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHH
T ss_conf 9999999999809954404088988998739888---99-8-74288999913147752132589738999999899999
Q ss_pred CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH--HHHHHHHHHCCCC----CCCCCCEEEEEECCHH-HHHH
Q ss_conf 1211000013577502578988789886271022478999--9999987641797----8998972899958979-9999
Q gi|254780486|r 253 NYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQL--INITDKIANKKIG----FSSQSHIQSIVIGDNK-SCLN 325 (381)
Q Consensus 253 ~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~--~~~~~~~~~~~~g----~~~~s~I~~v~~gd~~-~a~~ 325 (381)
T Consensus 226 ~~Ggl~--~--k~r~laA~~~~~---l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~ 298 (342)
T COG2008 226 RAGGLM--R--KARFLAAQGLYA---LEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALR 298 (342)
T ss_pred HHCCCH--H--HHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCHHHHHHHH
T ss_conf 865627--6--654899999999---731588888788899999999765326894343677662799977767889997
Q ss_pred HHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999779189862288888887039996287899999999999999998
Q gi|254780486|r 326 IAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
T Consensus 299 ~~~~~~~~~~~~~~~~--------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 299 LAGALFYRGVLIGAHG--------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHCHHHEEEEECCCCC--------CEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 5152120012215777--------558998502499999999999999964