HHsearch alignment for GI: 254780486 and conserved domain: PRK05093
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=100.00 E-value=7.5e-36 Score=243.60 Aligned_cols=336 Identities=16% Similarity=0.203 Sum_probs=237.3
Q ss_pred HHHHHCCCEEEECCCCEEEECCC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99997598399928976898034---465667798899999999998637868872244368858999999998401288
Q gi|254780486|r 14 QKIKSKGRHRQLLRRQDIWDFTS---HDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF 90 (381)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~l~f~s---~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~ 90 (381)
T Consensus 25 vi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~I~~Ai~~Q~~~l~~~~---~~-~--~~~~~~~lae~L~~~~~~ 97 (403)
T PRK05093 25 IPVRGEGSRVWDQQGREYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHIS---NV-F--TNEPALRLAKKLVDATFA 97 (403)
T ss_pred CEEEEECCEEEECCCCEEEECCCCHHHCEECC-CCHHHHHHHHHHHHHCCCCC---CC-C--CCHHHHHHHHHHHHCCCC
T ss_conf 08985629899799799999550888503289-97999999999987557775---74-1--488999999998641687
Q ss_pred CCEEEECCCCHHHHHHHHHH---C------CCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHH
Q ss_conf 85167416602456556663---1------6897100454202677526664087------------6403056881478
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---P------QATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSF 149 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---~------~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~L 149 (381)
T Consensus 98 drv~f~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~~d~~~l 177 (403)
T PRK05093 98 ERVFFANSGAEANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAL 177 (403)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCCCCHHHH
T ss_conf 75998386778999999999999997289987547777588688836877625880110277899977565563368888
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCC
Q ss_conf 99764310002478607971462157661346----89999986313608986131122234777640-11000013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~ 224 (381)
T Consensus 178 ~~~~~~-------~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-~GRtG~~fa~e~~gv~PDi 248 (403)
T PRK05093 178 KAVIDD-------KTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQ-TG-MGRTGDLYAYMHYGVTPDI 248 (403)
T ss_pred HHCCCC-------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEE-EC-CCCCCCCCCCCCCCCCCCE
T ss_conf 603377-------44799995766789975899999999998630168379860134-26-8877775222368989988
Q ss_pred CCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H-
Q ss_conf 21001346565302---675245100100001211000013577502578988789886271022478999999998-7-
Q gi|254780486|r 225 IVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-I- 299 (381)
Q Consensus 225 iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~- 299 (381)
T Consensus 249 v---~~gKglgg-G~Plsav~~~~~i~~~~~~~~~g~T~--~g~pla~aaala~L~~i~~~~-l~~~a~~~G~~l~~~L~ 321 (403)
T PRK05093 249 L---TSAKALGG-GFPIGAMLTTAEIASHFKVGTHGSTY--GGNPLACAVAEAVFDIINTPE-VLEGVKAREQRFVDGLQ 321 (403)
T ss_pred E---EECCCCCC-CCCEEEEEECHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH
T ss_conf 9---97300158-86427998728878650787726589--858999999999999996344-99999999999999999
Q ss_pred --HHCC---CCCCCCCCEEEEEECC--HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf --6417---9789989728999589--79999999999977918986228888888703999628789999999999999
Q gi|254780486|r 300 --ANKK---IGFSSQSHIQSIVIGD--NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 300 --~~~~---~g~~~~s~I~~v~~gd--~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
T Consensus 322 ~l~~~~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~-------~g~n~irl~PPL~it~~eid~~l~~l 394 (403)
T PRK05093 322 KINEKYGVFSEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLV-------AGPDVLRFAPSLVIPDADIDEGLARF 394 (403)
T ss_pred HHHHHCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEC-------CCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 99862898266654126999996587521699999999968928952-------79997999788448999999999999
Q ss_pred HHHHHHH
Q ss_conf 9998873
Q gi|254780486|r 373 PQIISEG 379 (381)
Q Consensus 373 ~~v~~E~ 379 (381)
T Consensus 395 ~~al~eV 401 (403)
T PRK05093 395 EKAVAKV 401 (403)
T ss_pred HHHHHHH
T ss_conf 9999998