HHsearch alignment for GI: 254780486 and conserved domain: PRK05965
>PRK05965 hypothetical protein; Provisional.
Probab=100.00 E-value=2.2e-33 Score=228.19 Aligned_cols=342 Identities=17% Similarity=0.180 Sum_probs=223.3
Q ss_pred HHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCC
Q ss_conf 9759839992897689803446---56677988999999999986378688722443688589999999984012--888
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GFE 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~e 91 (381)
T Consensus 34 ~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~hp~v~~Ai~~Q~~-~l~~~---~~~~~~~~~~~~~la~~L~~~~p~~l~ 108 (459)
T PRK05965 34 SAKGAFLTDASGHQLLDAFAGLWCVNVGY-GQESIVEAAAKQMR-KLPYA---TGYFHFGSEPAIRLAAELAERAPGSLN 108 (459)
T ss_pred EEEECEEEECCCCEEEECCHHHHHHHHHC-CCHHHHHHHHHHHH-HCCCC---CCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 62508899589999988686288656505-97999999999997-56773---566566866999999999985788868
Q ss_pred CEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC--------------CCE----EECC-
Q ss_conf 5167416602456556663---------16897100454202677526664087--------------640----3056-
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA--------------QAI----AIPH- 143 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a--------------~~~----~f~H- 143 (381)
T Consensus 109 ~v~f~~SGSEAvE~AlKlar~y~~a~g~~~r~~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 188 (459)
T PRK05965 109 HVYFTLGGSDAVDSAVRFITHYWNATGRPSKKQFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNP 188 (459)
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 79984867999999999999999972799875799971785899743102577743223568999986235788655687
Q ss_pred ----------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf ----------88147899764310002478607971462157661346----8999998631360898613112223477
Q gi|254780486|r 144 ----------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGP 209 (381)
Q Consensus 144 ----------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~ 209 (381)
T Consensus 189 ~~~~~~~~~~~~~~~l~~~i~~~---~~~~vAAvi~EPi~g~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~-TG-fGR 263 (459)
T PRK05965 189 VGDDPQAIIAASVAALEAKVAEL---GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVI-TG-FGR 263 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH---CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECC-CC-CCC
T ss_conf 88977889999999999999861---88757999954644668853287688799999987569179983054-17-762
Q ss_pred CCCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCC---CC--EECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7640-110000134652100134656530---267524510010000121---10--00013577502578988789886
Q gi|254780486|r 210 LGKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYA---KP--FIYTTSPSPILAVVACEALKLIK 280 (381)
Q Consensus 210 ~G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~---~~--~ifst~l~P~~~aaa~aal~~l~ 280 (381)
T Consensus 264 tG~~fa~e~~gv~PDiv---~~gKgL~gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaa~a~L~~l~ 340 (459)
T PRK05965 264 TGPLFACEAEGVVPDLM---TVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH 340 (459)
T ss_pred CCCCCCCCCCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 44741003666188888---873434578675168976489998761156656544567789989899999999999998
Q ss_pred HCCCHHHHHHHHHHHHHHHHHC--CCC----CCCCCCEEEEEEC-C----------HHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 2710224789999999987641--797----8998972899958-9----------799999999999779189862288
Q gi|254780486|r 281 RKPALHKSLLQLINITDKIANK--KIG----FSSQSHIQSIVIG-D----------NKSCLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~g-d----------~~~a~~~~~~L~~~Gi~v~~i~~P 343 (381)
T Consensus 341 ~~~-l~~~~~~~g~~l~~~L~~L~~~p~i~dVRG~GLm~gielv~d~~~~~~~~~~~~~~~~i~~~~~~~Glli~~~--- 416 (459)
T PRK05965 341 EGG-LLANGQAAAPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKASKTPFDAALEPADRIFDRAYANGLVFRAF--- 416 (459)
T ss_pred HCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEC---
T ss_conf 634-9999999999999999987649976867825627999971265446677554799999999999699299807---
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 888887039996287899999999999999998873
Q gi|254780486|r 344 TVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 344 tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
T Consensus 417 ----g~~vl~l~PPL~It~~eid~~~~~l~~al~ev 448 (459)
T PRK05965 417 ----GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----99989997882089999999999999999999