HHsearch alignment for GI: 254780486 and conserved domain: PRK06541
>PRK06541 hypothetical protein; Provisional.
Probab=100.00 E-value=4.2e-33 Score=226.50 Aligned_cols=347 Identities=15% Similarity=0.169 Sum_probs=227.4
Q ss_pred HHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 99759839992897689803446---56677988999999999986378688722443688589999999984012--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GF 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~ 90 (381)
T Consensus 39 ~rg~G~~l~D~dG~~ylD~~~g~~~~~lGH-~hp~v~~Ai~~Q~~-~l~~~~~~-~---~~~~~~~~lae~L~~~~p~~l 112 (460)
T PRK06541 39 VRGEGVYIWDDRGKRYLDGLAGLFVVQVGH-GRAELAEAAAEQAG-TLAFFPLW-S---YAHPPAIELAERLAALAPGDL 112 (460)
T ss_pred EECCCCEEEECCCCEEEECCCCHHHHHCCC-CCHHHHHHHHHHHH-HCCCCCCC-C---CCCHHHHHHHHHHHHHCCCCC
T ss_conf 966149899699999999651487531178-98999999999997-57875677-5---578799999999997488886
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCC--------------CE--------
Q ss_conf 85167416602456556663---------168971004542026775266640876--------------40--------
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQ--------------AI-------- 139 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~--------------~~-------- 139 (381)
T Consensus 113 ~~v~f~~SGsEA~E~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~ 192 (460)
T PRK06541 113 NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRA 192 (460)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCC
T ss_conf 98997087489999999999999996199986189996687167865788751880003788788999167688864457
Q ss_pred EECCCCHHHHHH----HHHH-HHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 305688147899----7643-10002478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 140 AIPHNNINSFAE----NINK-WRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 140 ~f~HnD~~~Le~----~l~~-~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavI~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVq-tG-fGRt 270 (460)
T PRK06541 193 PEHGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVI-CA-FGRL 270 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCE-EC-CCCC
T ss_conf 767899889999999999999985199857899845777878865686899999999746479537667512-07-8653
Q ss_pred CCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEE--CCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 640-110000134652100134656530---2675245100100001211000--0135775025789887898862710
Q gi|254780486|r 211 GKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAKPFI--YTTSPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 211 G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~i--fst~l~P~~~aaa~aal~~l~~~~~ 284 (381)
T Consensus 271 G~~fa~e~~gv~PDiv---~~gKglg~G~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa~avL~~i~~~~- 346 (460)
T PRK06541 271 GEMFGCERFGYVPDII---TCAKGITSGYSPLGAMIASDRLVEPFLDGKTMFLHGYTFGGHPVSAAVALANLDIFEREG- 346 (460)
T ss_pred CCCCHHCCCCCCCCHH---HHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-
T ss_conf 3732201689489514---122312588777046740399987652688531357678889899999999999998657-
Q ss_pred HHHHHHHHHHHHHHHHHC--CCC----CCCCCCEEEEEECC---------HHH-----HHHHHHHHHHCCEEEEEECCCC
Q ss_conf 224789999999987641--797----89989728999589---------799-----9999999997791898622888
Q gi|254780486|r 285 LHKSLLQLINITDKIANK--KIG----FSSQSHIQSIVIGD---------NKS-----CLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 285 ~~~~l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~gd---------~~~-----a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
T Consensus 347 l~~~v~~~G~~l~~~L~~l~~~p~v~dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~--- 423 (460)
T PRK06541 347 LLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD--- 423 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC---
T ss_conf 99999999999999999974699778741077389999545765456676467789999999999997895997458---
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88887039996287899999999999999998873
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
T Consensus 424 --~~~~virl~PPL~it~~eid~~l~~l~~aL~e~ 456 (460)
T PRK06541 424 --RGDPVVQLAPPLISGQEEFDEIEAILRSVLTEA 456 (460)
T ss_pred --CCCCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf --999889997893378999999999999999999