HHsearch alignment for GI: 254780486 and conserved domain: PRK07865
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed.
Probab=99.86 E-value=2e-18 Score=135.01 Aligned_cols=318 Identities=15% Similarity=0.147 Sum_probs=180.4
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCCCHH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288----851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG~~A 102 (381)
T Consensus 25 ~~~~vI~l~iG~P-d~p~P~~v~~a~~~a~~-~~~Y--~~---~~G~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga~~ 97 (364)
T PRK07865 25 HPDGIVDLSVGTP-VDPVPPVIQEALAAAAD-APGY--PT---TAGTPELREAIVAWLARRYGVTGLDPAAVLPVIGSKE 97 (364)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHCC-CCCC--CC---CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 8998398569899-89989999999996248-9998--99---8887999999999999983989899687997698899
Q ss_pred HHHHH-HHH-CCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH
Q ss_conf 56556-663-1689710045420267752666408764030568814789976431000247860797146215766134
Q gi|254780486|r 103 NMAIL-STL-PQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA 180 (381)
Q Consensus 103 n~~~i-~~l-~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a 180 (381)
T Consensus 98 ~l~~l~~~l~~~pGD~Vlip~P~Yp~y~~~~~~~g~~~v~~-----d~~~~~~-------~~~~~li~lnsP~NPTG~v~ 165 (364)
T PRK07865 98 LVAWLPTLLGLGPGDVVVVPELAYPTYEVGARLAGATVVRA-----DSLTELG-------PQTPALIWLNSPSNPTGRVL 165 (364)
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEC-----CCHHHCC-------CCCCEEEEECCCCCCCCCCC
T ss_conf 99999999707999989986678601999999819865610-----7887759-------87752999899969855117
Q ss_pred H---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEE---EHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC
Q ss_conf 6---89999986313608986131122234777640110---0001346521001346565302---6752451001000
Q gi|254780486|r 181 P---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTH---IIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL 251 (381)
Q Consensus 181 p---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~---~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l 251 (381)
T Consensus 166 s~e~l~~l~~la~~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~~GlRiG~i~~~~~li~~l 245 (364)
T PRK07865 166 GVDHLRKVVAWARERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAEL 245 (364)
T ss_pred CHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHH
T ss_conf 69999999999776718998254257642589886513864427775757999436523067774489996799999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHCCCCCC---CCCCEEEEEECCHHHHHH
Q ss_conf 012110000135775025789887898862710---22478999999998764179789---989728999589799999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINITDKIANKKIGFS---SQSHIQSIVIGDNKSCLN 325 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~~~~~~~~~g~~---~~s~I~~v~~gd~~~a~~ 325 (381)
T Consensus 246 ~~~-~~~~~~~~~~~-~Q~a~~aal~---~~~~~~~~~~~y~~rr~~l~~-~L~~~g~~~~~p~G~-fylw~~~~~~~~~ 318 (364)
T PRK07865 246 LAV-RKHAGMMVPAP-VQAAMVAALG---DDAHVREQRERYARRRAVLLP-ALEAAGFTVDHSEAG-LYLWATRGEDCWD 318 (364)
T ss_pred HHH-HHHCCCCCCHH-HHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCCE-EEEEEECCCCHHH
T ss_conf 999-98550237899-9999999957---939999999999999999999-998679766269922-7998888999999
Q ss_pred HHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 999999779189862288888887039996287899999999999999
Q gi|254780486|r 326 IAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
T Consensus 319 ~~~~l~e~gV~v~PG~~F-g~~g~~~vRls~~--~~~e~l~ea~~RLa 363 (364)
T PRK07865 319 TVAWLAERGILVAPGDFY-GPAGAQHVRVALT--ATDERIAAAVERLT 363 (364)
T ss_pred HHHHHHHCCEEEECCCCC-CCCCCCEEEEEEC--CCHHHHHHHHHHHC
T ss_conf 999999799899188743-6899986999965--98999999999868